Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 1505 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  113 bits (283), Expect = 4e-29
 Identities = 63/155 (40%), Positives = 90/155 (58%), Gaps = 3/155 (1%)

Query: 294  ALHDPLTHLPNRRYFIYTIEHYFENAKRSHSEGNFALLNIDIDRFKSINDSHGHSAGDKV 353
            A  D LT LPNR  F   + H    A RS++    ALL +D+DRFK INDS GH  GD +
Sbjct: 1079 ASFDTLTGLPNRTLFQDRLNHAISQAHRSNNI--VALLFLDLDRFKHINDSMGHHIGDLL 1136

Query: 354  LVACAERIKSSLRVSDLVARIGGDEFLVLIPRIHREQDVLKVSDNILKRISETPIVYDDK 413
            L A A R+++++R  D VAR+GGDEF +++  + + +    +S+ +LK   + P + DDK
Sbjct: 1137 LKAVAHRLQNAVREGDTVARLGGDEFTIILEGVAKTKAATLISEKVLKAF-QAPFLLDDK 1195

Query: 414  LIHVRVSIGYALYDQSFATPDEMFKLADERMYTAK 448
             + +  SIG +LY       D + K AD  MY AK
Sbjct: 1196 SLTISTSIGISLYPNDAEDVDSLIKFADTAMYHAK 1230