Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 878 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  108 bits (270), Expect = 7e-28
 Identities = 61/156 (39%), Positives = 94/156 (60%), Gaps = 4/156 (2%)

Query: 294 ALHDPLTHLPNRRYFIYTIEHYFENAKRSHSEGNFALLNIDIDRFKSINDSHGHSAGDKV 353
           A  DPLTHLPNR   +  ++    +AKR +++   A + ID+D FK INDS GHS GD++
Sbjct: 452 AYFDPLTHLPNRMKLMMQLKQELRHAKRLNAQ--LATVFIDVDLFKHINDSFGHSIGDEM 509

Query: 354 LVACAERIKSSLRVSDLVARIGGDEFLVLIPRIHREQDVLKVSDNILKRISETP-IVYDD 412
           LV  A+R++S L+  D+++RIGGDEF+ LI  I   +D    + N L+++ E P +V   
Sbjct: 510 LVELAKRLRSQLQEQDVLSRIGGDEFVALISGIQSHEDA-AAAINQLRQVFEQPFVVSTG 568

Query: 413 KLIHVRVSIGYALYDQSFATPDEMFKLADERMYTAK 448
             + +  S+G ++Y    +  D + + AD  MY AK
Sbjct: 569 DHLRLTASMGVSIYPDDGSNADTLLRNADAAMYRAK 604