Pairwise Alignments

Query, 457 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 876 a.a., diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) from Shewanella sp. ANA-3

 Score =  108 bits (270), Expect = 7e-28
 Identities = 61/162 (37%), Positives = 93/162 (57%), Gaps = 2/162 (1%)

Query: 294 ALHDPLTHLPNRRYFIYTIEHYFENAKRSHSEGNFALLNIDIDRFKSINDSHGHSAGDKV 353
           A HD LT LPNR  F+  +    ++ +R HS   FALL ID+DRFK IND+ GH  GD+ 
Sbjct: 452 AKHDALTGLPNRAMFMERLNQAIKHVRR-HSLEQFALLFIDLDRFKQINDTMGHLEGDRF 510

Query: 354 LVACAERIKSSLRVSDLVARIGGDEFLVLIPRIHREQDVLKVSDNILKRISETPIVYDDK 413
           L+  A R+++ +R +D +AR+GGDEF++L+  I+   D   V++ ++++IS +  +   +
Sbjct: 511 LIETATRLRACIRSNDTLARLGGDEFVILLDSINGINDARDVAERVIQKISLSYTLGAIE 570

Query: 414 LIHVRVSIGYALYDQSFATPDEMFKLADERMYTAKRRQNPLY 455
             H   SIG  +      T + M + AD  MY AK      Y
Sbjct: 571 -FHSGASIGITISGNKLDTSESMLRNADTAMYQAKANGKGCY 611