Pairwise Alignments

Query, 505 a.a., DUF3612 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., XRE family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  757 bits (1955), Expect = 0.0
 Identities = 377/503 (74%), Positives = 414/503 (82%), Gaps = 1/503 (0%)

Query: 1   MSVSKSLVRQSHFLGTKVRNLRKRNHLTMEDLSARCIRVSPEYAPSVSYLSMIERGKRVP 60
           M+  KSL+RQSHFLGTK+RNLRKRNHLTMEDLS+RC+RV P  APSVSYLSMIERGKRVP
Sbjct: 1   MTSEKSLMRQSHFLGTKIRNLRKRNHLTMEDLSSRCVRVDPGSAPSVSYLSMIERGKRVP 60

Query: 61  SVEMLEVIAEVFQKDPIWFLDDEPEQIDITPEKGNRGGISGMALEPSFLFSNDILQIAIP 120
           S  MLEVIA+VF+K P WFLDD PE+  ITP+KG RGGISGMALEP FLFS DILQIAIP
Sbjct: 61  SAAMLEVIAKVFEKSPDWFLDDAPEEDAITPDKGRRGGISGMALEPGFLFSKDILQIAIP 120

Query: 121 EMLSQTGITGRQFAHLLIRAHQESLQNHFPDLERAAEEVGLKRLNLSVTDLLDIAKGLGL 180
           EMLSQTGI+GRQFAHLLIRAHQE  QNHFPDLERAAEEVG KRLNLS  DL  I K +G+
Sbjct: 121 EMLSQTGISGRQFAHLLIRAHQEHHQNHFPDLERAAEEVGDKRLNLSGDDLTAICKQMGM 180

Query: 181 DVRWVKRTPHDVTDELGVSAKQLVTSFFEPPGRIYLNEILREYPTRLKYDLAVYIGHNVL 240
            +R+ K  P D  D  GVS  QLVTSFFEPP  I++NE L++ P RLKYDLAV+IGH VL
Sbjct: 181 KIRFFKEPPQDQVDANGVSTHQLVTSFFEPPSTIFINEALKKNPERLKYDLAVHIGHCVL 240

Query: 241 HNKDGLKSVLSVGHTQGWDEMVETSPSSELNSQDILQAWRDFESSFFAGALLCPKVPFRQ 300
           HNKDGLK+VL+VG   G  E  +   SS +N+QDIL AWRDFESSFFAGALLCPKVPFRQ
Sbjct: 241 HNKDGLKNVLAVGRGIGTGEQ-DADISSTVNAQDILSAWRDFESSFFAGALLCPKVPFRQ 299

Query: 301 LLDRNGYEISVHQKAGVSPSVAMRRMTVVSPYPHWHYFDAYGEGKLKAVYRGNGIPLPWG 360
           LL+R GYEI  H+K GVS SVAMRRMTVVSPYPHWHYFDAY  GKLKAVYRGNGIPLPWG
Sbjct: 300 LLERGGYEIDTHKKIGVSASVAMRRMTVVSPYPHWHYFDAYAPGKLKAVYRGNGIPLPWG 359

Query: 361 NMRKVNDPCQHWAVFRRLSQPQQGSSAQISILTVGDEPRIYCCESLNVVDPAGNNRVLCA 420
           NMR+V DPCQHWAVFR +S+P  GSSAQISIL VG  PRIYCCES  VVD AGN+ VLCA
Sbjct: 360 NMRQVPDPCQHWAVFRMISEPSDGSSAQISILDVGGSPRIYCCESTKVVDLAGNHHVLCA 419

Query: 421 GIDLNPAINAQGGDALAIAQELKMSCVQKGGTTAIPAPIKRDLRTIAKILNINWVERGIE 480
           GIDLNPAI+AQG DAL++A+ LK  CV  GG   IP  IKR L +IA+ILNINWVERGI+
Sbjct: 420 GIDLNPAIDAQGTDALSLAEALKSHCVASGGQGEIPTAIKRQLMSIARILNINWVERGID 479

Query: 481 NEARLICSRGAVCPRKPRCYGEC 503
             ARLICSRG VCPRKP CYG C
Sbjct: 480 KGARLICSRGNVCPRKPSCYGGC 502