Pairwise Alignments

Query, 505 a.a., DUF3612 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., XRE family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  728 bits (1878), Expect = 0.0
 Identities = 359/507 (70%), Positives = 412/507 (81%), Gaps = 3/507 (0%)

Query: 1   MSVSKSLVRQSHFLGTKVRNLRKRNHLTMEDLSARCIRVSPEYAPSVSYLSMIERGKRVP 60
           M  + SL+R+SHFLGTK+RNLRKRN+LTMEDLSARC+RV  + APSVSYLSMIERGKRVP
Sbjct: 1   MKTNSSLMRKSHFLGTKIRNLRKRNNLTMEDLSARCVRVDADSAPSVSYLSMIERGKRVP 60

Query: 61  SVEMLEVIAEVFQKDPIWFLDDEPEQIDITPEKGNRGGISGMALEPSFLFSNDILQIAIP 120
           S  ML VIA VFQK+  WFLDD PE+  ITP KG+RGGISGMALEPSFLFSN+ILQIAIP
Sbjct: 61  SAGMLAVIAAVFQKEVDWFLDDAPEEQAITPVKGSRGGISGMALEPSFLFSNEILQIAIP 120

Query: 121 EMLSQTGITGRQFAHLLIRAHQESLQNHFPDLERAAEEVGLKRLNLSVTDLLDIAKGLGL 180
           EMLSQTGI+GRQFAHLLIRAHQE  QNHFPDLERAAEEVGLKR+ LS+ DLL I + LGL
Sbjct: 121 EMLSQTGISGRQFAHLLIRAHQEHHQNHFPDLERAAEEVGLKRMPLSLEDLLAIVQRLGL 180

Query: 181 DVRWVKRTPHDVTDELGVSAKQLVTSFFEPPGRIYLNEILREYPTRLKYDLAVYIGHNVL 240
            V+W  R P  + +E G   + ++TS+FE P +I LN++L ++  RLKYDLAV+IGH+VL
Sbjct: 181 VVKWFTRAPKAIREEAGAGKQHIITSYFEQPNKICLNQLLNQHTRRLKYDLAVHIGHSVL 240

Query: 241 HNKDGLKSVLSVGHTQGW---DEMVETSPSSELNSQDILQAWRDFESSFFAGALLCPKVP 297
           HNKDGLKS++  G + G    DE      SS +++QDIL AWRDFESSFFAGALLCPKVP
Sbjct: 241 HNKDGLKSIMVAGRSHGTSLVDEADNRGQSSTVDAQDILHAWRDFESSFFAGALLCPKVP 300

Query: 298 FRQLLDRNGYEISVHQKAGVSPSVAMRRMTVVSPYPHWHYFDAYGEGKLKAVYRGNGIPL 357
           FRQLLDR+GYEI V +   VSPSVAMRRMT VSPY HWHYFDAY  GKLKAVYRGNGIPL
Sbjct: 301 FRQLLDRHGYEIDVAKLVDVSPSVAMRRMTAVSPYSHWHYFDAYSPGKLKAVYRGNGIPL 360

Query: 358 PWGNMRKVNDPCQHWAVFRRLSQPQQGSSAQISILTVGDEPRIYCCESLNVVDPAGNNRV 417
           PWGNMR+V DPCQHWAVFR ++   QGSSAQISIL V +EP+IYCCES+ V D AGN  V
Sbjct: 361 PWGNMRQVEDPCQHWAVFRMINASTQGSSAQISILDVANEPKIYCCESIRVKDLAGNPHV 420

Query: 418 LCAGIDLNPAINAQGGDALAIAQELKMSCVQKGGTTAIPAPIKRDLRTIAKILNINWVER 477
           LCAGIDLNPAI AQGGDA  +AQ+LK  CV  GG+  +P+ IK D++ +AKILNINWVER
Sbjct: 421 LCAGIDLNPAIEAQGGDANQVAQQLKEVCVDNGGSAPLPSNIKTDIKRVAKILNINWVER 480

Query: 478 GIENEARLICSRGAVCPRKPRCYGECG 504
           GI++EARLICSRGA CPRKP CY   G
Sbjct: 481 GIDSEARLICSRGASCPRKPSCYESGG 507