Pairwise Alignments

Query, 505 a.a., DUF3612 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 503 a.a., transcriptional regulator, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  764 bits (1972), Expect = 0.0
 Identities = 377/493 (76%), Positives = 421/493 (85%), Gaps = 1/493 (0%)

Query: 8   VRQSHFLGTKVRNLRKRNHLTMEDLSARCIRVSPEYAPSVSYLSMIERGKRVPSVEMLEV 67
           +R+SHFLGTK+RNLRKRN+LTMEDLSARCIRV    APSVSYLSMIERGKRVPS EML V
Sbjct: 1   MRKSHFLGTKIRNLRKRNNLTMEDLSARCIRVDASSAPSVSYLSMIERGKRVPSAEMLAV 60

Query: 68  IAEVFQKDPIWFLDDEPEQIDITPEKGNRGGISGMALEPSFLFSNDILQIAIPEMLSQTG 127
           IA VFQKD  WFLDD PE+  ITP+KG RGGISGMALEPSFLFSNDILQIAIPEMLSQTG
Sbjct: 61  IATVFQKDVDWFLDDVPEESAITPDKGRRGGISGMALEPSFLFSNDILQIAIPEMLSQTG 120

Query: 128 ITGRQFAHLLIRAHQESLQNHFPDLERAAEEVGLKRLNLSVTDLLDIAKGLGLDVRWVKR 187
           I+GRQFAHLLIRAHQE  QNHFPDLERAAEEVGLKR+ LS+ ++LDIAKG+GL ++W+  
Sbjct: 121 ISGRQFAHLLIRAHQEHHQNHFPDLERAAEEVGLKRMPLSLDEMLDIAKGVGLKIKWIDS 180

Query: 188 TPHDVTDELGVSAKQLVTSFFEPPGRIYLNEILREYPTRLKYDLAVYIGHNVLHNKDGLK 247
           TP +V DE GVS+ QLVTSFFEPP  IY+N++L+  P+RLKYDLA +IGH VLHNKDGLK
Sbjct: 181 TPQEVIDERGVSSHQLVTSFFEPPSTIYINKMLKNRPSRLKYDLAAHIGHCVLHNKDGLK 240

Query: 248 SVLSVGHTQGWDEMVETSPSSELNSQDILQAWRDFESSFFAGALLCPKVPFRQLLDRNGY 307
           SV+  G     DE V T  S+ LN+QDIL AWRDFESSFFAGALLCPKVP+RQLLDR+GY
Sbjct: 241 SVMISGRKLQMDEEV-TMQSNTLNAQDILHAWRDFESSFFAGALLCPKVPYRQLLDRHGY 299

Query: 308 EISVHQKAGVSPSVAMRRMTVVSPYPHWHYFDAYGEGKLKAVYRGNGIPLPWGNMRKVND 367
           EI VH++  VS SVAMRRMTVVSPYPHWHYFDAY  GKLKAVYRGNGIPLPWGNMR V D
Sbjct: 300 EIEVHKQLQVSASVAMRRMTVVSPYPHWHYFDAYAPGKLKAVYRGNGIPLPWGNMRLVED 359

Query: 368 PCQHWAVFRRLSQPQQGSSAQISILTVGDEPRIYCCESLNVVDPAGNNRVLCAGIDLNPA 427
           PCQHWAVFR +S+P  G+SAQISIL VG+EPRIYCCES+ V D AGN  VLCAGIDLNPA
Sbjct: 360 PCQHWAVFRMISEPSVGTSAQISILNVGNEPRIYCCESIKVEDSAGNPHVLCAGIDLNPA 419

Query: 428 INAQGGDALAIAQELKMSCVQKGGTTAIPAPIKRDLRTIAKILNINWVERGIENEARLIC 487
           I AQG DAL+IA +LK +CV  GG+ AIP  IK DL +IAKILNINW+ERGI+N+ARLIC
Sbjct: 420 IEAQGKDALSIAHDLKAACVTGGGSVAIPKHIKSDLVSIAKILNINWIERGIKNDARLIC 479

Query: 488 SRGAVCPRKPRCY 500
           SRGAVCPR+P CY
Sbjct: 480 SRGAVCPRQPSCY 492