Pairwise Alignments

Query, 505 a.a., DUF3612 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., XRE family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  769 bits (1985), Expect = 0.0
 Identities = 381/508 (75%), Positives = 429/508 (84%), Gaps = 5/508 (0%)

Query: 1   MSVSKSLVRQSHFLGTKVRNLRKRNHLTMEDLSARCIRVSPEYAPSVSYLSMIERGKRVP 60
           M   +SL+R+SHFLGTK+RNLRKRN+LTMEDLSARCIRV    APSVSYLSMIERGKRVP
Sbjct: 1   MRNDQSLMRKSHFLGTKIRNLRKRNNLTMEDLSARCIRVDAGSAPSVSYLSMIERGKRVP 60

Query: 61  SVEMLEVIAEVFQKDPIWFLDDEPEQIDITPEKGNRGGISGMALEPSFLFSNDILQIAIP 120
           S EML VIA VFQKD  WFLDD PE+  ITP+KG RGGISGMALEPSFLFSNDILQIAIP
Sbjct: 61  SAEMLAVIATVFQKDVDWFLDDVPEESAITPDKGRRGGISGMALEPSFLFSNDILQIAIP 120

Query: 121 EMLSQTGITGRQFAHLLIRAHQESLQNHFPDLERAAEEVGLKRLNLSVTDLLDIAKGLGL 180
           EMLSQTGI+GRQFAHLLIRAHQE  QNHFPDLERAAEEVGLKR+ LS+ ++LDIAKG+GL
Sbjct: 121 EMLSQTGISGRQFAHLLIRAHQEHHQNHFPDLERAAEEVGLKRIPLSLEEMLDIAKGVGL 180

Query: 181 DVRWVKRTPHDVTDELGVSAKQLVTSFFEPPGRIYLNEILREYPTRLKYDLAVYIGHNVL 240
            ++W+  TP +V DE GVS+ QLVTSFFEPP  IY+N++L+  P+RLKYDLA +IGH VL
Sbjct: 181 KIKWIDSTPQEVIDERGVSSHQLVTSFFEPPSTIYINKVLKHRPSRLKYDLAAHIGHCVL 240

Query: 241 HNKDGLKSVLSVGHTQGWDEMVETSPSSELNSQDILQAWRDFESSFFAGALLCPKVPFRQ 300
           HNKDGLKSV+  G     DE V T  S+ LN+QDIL AWRDFESSFFAGALLCPKVP+RQ
Sbjct: 241 HNKDGLKSVMISGRKLEMDEEV-TMQSNTLNAQDILHAWRDFESSFFAGALLCPKVPYRQ 299

Query: 301 LLDRNGYEISVHQKAGVSPSVAMRRMTVVSPYPHWHYFDAYGEGKLKAVYRGNGIPLPWG 360
           LLDR+GYEI VH++  VS SVAMRRMTVVSPYPHWHYFDAY  GKLKAVYRGNGIPLPWG
Sbjct: 300 LLDRHGYEIEVHKQLQVSASVAMRRMTVVSPYPHWHYFDAYAPGKLKAVYRGNGIPLPWG 359

Query: 361 NMRKVNDPCQHWAVFRRLSQPQQGSSAQISILTVGDEPRIYCCESLNVVDPAGNNRVLCA 420
           NMR V DPCQHWAVFR +S+P+ G+SAQISIL VG+EPRIYCCES+ V D AGN  VLCA
Sbjct: 360 NMRLVEDPCQHWAVFRMISEPKVGTSAQISILNVGNEPRIYCCESIKVEDSAGNPHVLCA 419

Query: 421 GIDLNPAINAQGGDALAIAQELKMSCVQKGGTTAIPAPIKRDLRTIAKILNINWVERGIE 480
           GIDLNPAI AQG DAL+IA +LK +CV  GG+ AIP  IK DL ++AKILNINW+ERGI+
Sbjct: 420 GIDLNPAIEAQGKDALSIAHDLKAACVSGGGSVAIPKHIKSDLVSVAKILNINWIERGIK 479

Query: 481 NEARLICSRGAVCPRKPRCY----GECG 504
           N+ARLICSRGAVCPR+P CY     +CG
Sbjct: 480 NDARLICSRGAVCPRQPSCYQAGKSQCG 507