Pairwise Alignments

Query, 202 a.a., malate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 187 a.a., malate synthase domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  142 bits (357), Expect = 5e-39
 Identities = 90/194 (46%), Positives = 119/194 (61%), Gaps = 21/194 (10%)

Query: 11  MNMLTFDKTEIQHQNKPFIAEAVFAVETVAANQQREKQTKAKQLLDRLFPLENGTHQDVT 70
           MNM      +IQ     FIAE V AV  V A  + EK   AKQ LDR FPL++G+HQ+V 
Sbjct: 1   MNMSIIKSHQIQPNLNSFIAEEVLAVAQVNA-AEHEKLAHAKQFLDRHFPLDSGSHQEVI 59

Query: 71  AYVIDYNHLLAYFQDGRHSGLKYPKQFVAFNGSKENPSHLLFRDGQGSHVEMTLGCQRGT 130
           +YV+ Y HLLA+F DG HSGL+  KQFVAFNG+K+ PS ++ +D QG HVE+   C   T
Sbjct: 60  SYVVYYQHLLAFFADGSHSGLRQAKQFVAFNGTKDAPSAIVLQD-QGCHVEL---CFDRT 115

Query: 131 GCIELREIA---DIQLETCTVLNHSNDHAQPSTT----IRHWVSLIKGDEQGRPQAR-IE 182
           G I  R++A   D+Q+ET   L      A+P TT     RHW+SL+     G P A  I+
Sbjct: 116 GMIGARDLANLEDVQIETPMELT-----AEPKTTRNTASRHWLSLL---HAGMPSANDIQ 167

Query: 183 EKEYTARNGDEYFL 196
           +K +TA++G +Y L
Sbjct: 168 DKLFTAKDGGDYSL 181