Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Pseudomonas fluorescens FW300-N2E2

 Score =  108 bits (271), Expect = 1e-28
 Identities = 75/206 (36%), Positives = 108/206 (52%), Gaps = 9/206 (4%)

Query: 136 TVIRRLVSDSKDIRHSTNFLNNQLNAATLEISRLKEQLAKVQKDALFDSLSGLYNRRAFD 195
           T +  L S    I+H    + +  + AT    +L+   A++Q  +  D L+GLYNR  ++
Sbjct: 112 TTLLPLRSPDNTIKHICLVIYDVTDVATNR-HQLQAANAQLQLLSSTDRLTGLYNRGHWE 170

Query: 196 GDMFTLI----HAGQQVSLIMLDIDHFKALNDNYGHLFGDQIIRAIAKRLQSLCRDGVTA 251
            D+          G  +SL+MLDIDHFK +ND YGH  GD++I  +A+ L+   RD    
Sbjct: 171 SDLKAAYARHQRYGHALSLVMLDIDHFKRVNDTYGHQAGDKVIEQVARLLREHARDSDVV 230

Query: 252 YRYGGEEFALIAPHKSLRIARQFAESVRRSIEKLTVKDRRSGQSVGSITASFGVVEKIE- 310
            RYGGEEF ++        A  FAE +R S+E L V    + Q++   T S GV +  + 
Sbjct: 231 GRYGGEEFGVVLSDTDSSGAHAFAERMRHSVEALEV--LYNDQTI-RFTISLGVADLSQP 287

Query: 311 GDSLESLIGRADGLLYEAKNLGRNRV 336
            +    LI RAD  LY +K  GRNRV
Sbjct: 288 SNDHADLIARADQALYTSKKTGRNRV 313