Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  103 bits (258), Expect = 4e-27
 Identities = 64/174 (36%), Positives = 95/174 (54%), Gaps = 6/174 (3%)

Query: 168 RLKEQLA-KVQKDALFDSLSGLYNRR----AFDGDMFTLIHAGQQVSLIMLDIDHFKALN 222
           RL +QL    + +A  D L+G++NRR     F+ +      +GQ + ++M+D+D FK  N
Sbjct: 112 RLTDQLIINSEHNANIDMLTGVFNRRWLEHIFERESARCAFSGQPLCMLMIDVDEFKPYN 171

Query: 223 DNYGHLFGDQIIRAIAKRLQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSI 282
           D +GH+ GD  +  +A+ L +  R   +  R+GGEEF  + P   L  AR  AE +R+ +
Sbjct: 172 DRHGHIAGDHALCQVARLLGTQLRPKDSLVRFGGEEFVTLLPELDLPAARLIAERLRQRV 231

Query: 283 EKLTVKDRRSGQSVGSITASFGVVEKIEGDSLESLIGRADGLLYEAKNLGRNRV 336
            +        G S+  +T S G+      D+LE LIGRAD  LY AK  GRNRV
Sbjct: 232 AQNDTIATPIG-SLPGVTISVGLARMRPSDTLEDLIGRADKALYLAKAQGRNRV 284