Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  105 bits (262), Expect = 2e-27
 Identities = 72/185 (38%), Positives = 99/185 (53%), Gaps = 20/185 (10%)

Query: 158 QLNAATLEISRLKEQLAKVQKDALFDSLSGLYNRRAFDGDMFTLIHA-----GQQVSLIM 212
           QL AA  E+ RL             D L+GLYNR  ++ +M  L +A       Q +L+M
Sbjct: 143 QLQAANAELQRLSST----------DRLTGLYNRGHWE-EMLRLDYARHRRYDSQAALVM 191

Query: 213 LDIDHFKALNDNYGHLFGDQIIRAIAKRLQSLCRDGVTAYRYGGEEFALIAPHKSLRIAR 272
            DIDHFKA+ND+YGH  GD +I+ +A  ++   RD   A RYGGEEF ++ P    + A 
Sbjct: 192 FDIDHFKAINDSYGHQVGDSVIQQVADLIRENLRDSDVAGRYGGEEFVVLLPDTDKQGAL 251

Query: 273 QFAESVRRSIEKLTVKDRRSGQSVGSITASFGVVE-KIEGDSLESLIGRADGLLYEAKNL 331
            FAE +R+++E    ++ R  Q     T S GV +  +   S   LI  AD  LY +K  
Sbjct: 252 IFAERLRQAVE---AREVRHEQYRIRFTISLGVADLSMPTTSHAQLIEWADSALYVSKAC 308

Query: 332 GRNRV 336
           GRNRV
Sbjct: 309 GRNRV 313