Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 581 a.a., GGDEF family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  110 bits (276), Expect = 7e-29
 Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 5/184 (2%)

Query: 156 NNQLNAATLEISRLKEQLAKVQKDALFDSLSGLYNRRAFDGDMFTLIHAGQQ----VSLI 211
           N +L      +  LK   A+V+  +  D L+G++NRR FD  +   +   Q+    + LI
Sbjct: 378 NLELQQMVSSLETLKSYAAQVKAISEIDGLTGIHNRRYFDLKLDAALARHQKEHIHLGLI 437

Query: 212 MLDIDHFKALNDNYGHLFGDQIIRAIAKRLQSLCRDGVTAY-RYGGEEFALIAPHKSLRI 270
           M D+D+FK  ND YGHL GDQ ++ +  R++ L  +G   + RYGGEEF L+      R 
Sbjct: 438 MFDLDYFKQFNDTYGHLAGDQCLKDVVNRIKQLLPNGNETFARYGGEEFVLLVQGYDWRA 497

Query: 271 ARQFAESVRRSIEKLTVKDRRSGQSVGSITASFGVVEKIEGDSLESLIGRADGLLYEAKN 330
            RQ AE +R SI  L +  R++ Q + +++     + + +  + + LI   D  LY AK 
Sbjct: 498 LRQIAEDIRESIVTLAIPHRQTPQGIATLSLGIAHLPQDQRATAQELIATGDTALYRAKR 557

Query: 331 LGRN 334
            G+N
Sbjct: 558 RGKN 561