Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  154 bits (390), Expect = 2e-42
 Identities = 103/335 (30%), Positives = 170/335 (50%), Gaps = 17/335 (5%)

Query: 9   KSTANLKKVVPLMMKHHVAATPVNYALWYTYVDQAIPQLNAEMDSVLKNFGLCPPASGEH 68
           +S   L+K VP M    +  TP NYA+WY Y   A   L   ++ +++N           
Sbjct: 27  ESAGILRKAVPQMSALGIPVTPDNYAVWYAYYQGADLALVRAINGLMENQVSFSAEVCRG 86

Query: 69  LYQQYIATKAETNINQLRANVEVLLGEISSSMSDTLSDTSSFANVIDKSFKDLERVEQDN 128
           LY  +I   A   +  +    ++L+  + S +S   S + +F   I+ SF    R+ Q+ 
Sbjct: 87  LYSSFIQNNAPEVLENVHLETQLLINGLLSKISLLTSGSETFQLAIE-SFGQQLRLPQEA 145

Query: 129 LS----IEEVMTVIRRLVSDSKDIRHSTNFLNNQLNAATLEISRLKEQLAKVQKDALFDS 184
            S    +E V+  + ++VS++ DI  S   ++ +LN        L+ ++ ++   +L D 
Sbjct: 146 ESLHRLVEGVLVEVDKVVSENADIHSSLKSMDQELN-------HLRAEITELSVISLTDK 198

Query: 185 LSGLYNRRAFDGDMFT-LIHAGQQVSLIMLDIDHFKALNDNYGHLFGDQIIRAIAKRLQS 243
           L+GL NRRAF+  +    + +  + SL+++DIDHFK  ND +GH  GD+++  +A+ L+ 
Sbjct: 199 LTGLNNRRAFESRLAQEFLPSTPKCSLLVIDIDHFKQFNDTWGHNAGDKVLVYVAQNLKQ 258

Query: 244 LCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSI--EKLTVKDRRSGQSVGSITA 301
             +      RYGGEEF ++    S   A   AE +R  I  +KLT+K  +    +G ++ 
Sbjct: 259 AVKGEDLVARYGGEEFVIVLKDTSAEDAANIAEKLRDRIANKKLTLK--KDNLDLGKVSV 316

Query: 302 SFGVVEKIEGDSLESLIGRADGLLYEAKNLGRNRV 336
           S GV +    ++ E    RADG LY AK  GRNRV
Sbjct: 317 SIGVAKAYANETPEQFFERADGALYRAKGTGRNRV 351