Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  108 bits (269), Expect = 2e-28
 Identities = 69/195 (35%), Positives = 109/195 (55%), Gaps = 15/195 (7%)

Query: 153 NFLNNQLNAATLEISRLKEQLA-KVQKD-----ALFDSLSGLYNRRAFDGDMFTLI---- 202
           +F++   NA TL+ +R+K Q+  K Q D     A  D L+G+ NR  FD  + T +    
Sbjct: 113 DFISKPFNATTLK-NRIKAQVTLKRQSDLLRRLAFLDGLTGVKNRHFFDQYLETQLMLAR 171

Query: 203 HAGQQVSLIMLDIDHFKALNDNYGHLFGDQIIRAIAKRLQSLC-RDGVTAYRYGGEEFAL 261
              Q + ++M+DID+FK  ND++GH  GD+ +R++A+ L   C R      RYGGEEF +
Sbjct: 172 RQSQAICVLMVDIDYFKQYNDSFGHQMGDEALRSVAQALGESCRRPADLVARYGGEEFVV 231

Query: 262 IAPHKSLRIARQFAESVRRSIEKLTVKDRRSGQSVGSITASF-GVVEKIEGDSLESLIGR 320
           + P+       +  E ++ +I +L +       + G +T S  G++   +  S E+L+G 
Sbjct: 232 VLPNTPKNGVERVIERIQGAIAELDI--HHPASATGILTVSMGGMIWLADYQSTEALLGE 289

Query: 321 ADGLLYEAKNLGRNR 335
           AD LLY AK+LGRNR
Sbjct: 290 ADKLLYRAKSLGRNR 304