Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

 Score =  105 bits (262), Expect = 2e-27
 Identities = 66/159 (41%), Positives = 92/159 (57%), Gaps = 8/159 (5%)

Query: 183 DSLSGLYNRR----AFDGDMFTLIHAGQQVSLIMLDIDHFKALNDNYGHLFGDQIIRAIA 238
           D L+GL NRR    AF G + T   A  ++SL++LD+DHFK++ND YGH  GD ++  +A
Sbjct: 201 DPLTGLANRRGLLDAFGGAVLTRSRAPHRLSLLVLDLDHFKSINDRYGHEAGDGVLCHVA 260

Query: 239 KRLQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSIEKLTVKDRRSGQSVGS 298
             ++ + R      R GGEEFAL+ P   L  AR+ AE +R++IE   +     G S+ S
Sbjct: 261 HVIKGMIRANDLIARIGGEEFALLLPDTDLAGAREVAEKIRKAIESTALIG--PGGSL-S 317

Query: 299 ITASFGVVE-KIEGDSLESLIGRADGLLYEAKNLGRNRV 336
           +T S GV E   +     +L   AD  LY+AK  GRNRV
Sbjct: 318 VTVSIGVAELDPQYPDFAALFSSADHRLYQAKKAGRNRV 356