Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  124 bits (311), Expect = 4e-33
 Identities = 71/174 (40%), Positives = 104/174 (59%), Gaps = 11/174 (6%)

Query: 168 RLKEQLAKVQKDALFDSLSGLYNRRAFDGDMFTLI----HAGQQVSLIMLDIDHFKALND 223
           +L E+ AK+QK A  D L+GLYNR   D  +   +    H     SL++LD+D+FK +ND
Sbjct: 183 QLGERNAKIQKLAETDKLTGLYNREKLDITLEEYVLQSRHRQTPFSLLILDVDYFKQIND 242

Query: 224 NYGHLFGDQIIRAIAKRLQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSIE 283
            +GHL GD+++  +A  L+SLCR+G    R+GGEEF ++ P   L I    AE +R+ I 
Sbjct: 243 AHGHLTGDRVLVQLADSLRSLCREGDFLARWGGEEFVILLPETQLSICVAVAEQLRQDI- 301

Query: 284 KLTVKDRRSGQSVGSITASFGVVEKIEGDSLESLIGRADGLLYEAKNLGRNRVM 337
                 +  GQ   S+T S G  +  E D+ ++L+ RAD  LY+AK+ GRNRV+
Sbjct: 302 ---AAQKFDGQ---SLTISLGAAQLREDDTTKTLVNRADNALYQAKHTGRNRVV 349