Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  136 bits (343), Expect = 7e-37
 Identities = 96/330 (29%), Positives = 162/330 (49%), Gaps = 13/330 (3%)

Query: 14  LKKVVPLMMKHHVAATPVNYALWYTYVDQAIPQLNAEMDSVLKNFGLCPPASGEHLYQQY 73
           L+  VP M + ++  TP NYA+WY Y       L   +D+++ +           LY  +
Sbjct: 22  LRHAVPRMSELNIPVTPDNYAVWYEYFRGVNLDLKRAIDTLVASRAQFTAEVNAGLYNSF 81

Query: 74  IATKAETNINQLRANVEVLLGEISSSMSDTLSDTSSFANVIDKSFKDLERVEQDNLSIEE 133
           I  ++   I  ++   ++L+    + +S+  + T+ F N+   +F+     + D  ++E 
Sbjct: 82  IREQSPEVIENVQIETQILINNFMTRLSEVTAGTAQF-NLSLTTFQQNISQDPDPKTLER 140

Query: 134 VMTVIRRLVSDSKDIRHSTNFLNNQLNAATLEISRLKEQLAKVQKDALFDSLSGLYNRRA 193
           ++  +   VS    +  S   +   L     E++ LK ++  +    + D L+ L NRRA
Sbjct: 141 LVDTLAEEVSQ---VVISNRQMEANLKTMNQEVAALKAEMEDLNIAVMTDQLTSLRNRRA 197

Query: 194 FDGDMFTLIHAGQQV----SLIMLDIDHFKALNDNYGHLFGDQIIRAIAKRLQSLCRDGV 249
           FD ++   I   ++     SL+++DID+FK  ND +GHL GD+++  IA  L+   +   
Sbjct: 198 FDEEVLGHIQRFRREQRLSSLLLVDIDNFKQFNDTHGHLVGDKVLAYIALALKQGVKGDD 257

Query: 250 TAYRYGGEEFALIAPHKSLRIARQFAESVRRSIEKLTV---KDRRSGQSVGSITASFGVV 306
              RYGGEEF ++ P      A   AE +R  I +  +   KD++   S+G+IT S GV 
Sbjct: 258 FVARYGGEEFVILLPDTEHSGAMVVAEQLRARIAERHLSIGKDKK--LSLGAITVSIGVA 315

Query: 307 EKIEGDSLESLIGRADGLLYEAKNLGRNRV 336
                D  ES + RAD  LY AK+ GRN V
Sbjct: 316 TLRLDDDRESYLVRADEALYRAKSAGRNCV 345