Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  330 bits (845), Expect = 4e-95
 Identities = 159/339 (46%), Positives = 230/339 (67%), Gaps = 1/339 (0%)

Query: 2   MTTEDFKKSTANLKKVVPLMMKHHVAATPVNYALWYTYVDQAIPQLNAEMDSVLKNFGLC 61
           M+ +  +++  NLK+ VPLM+KH +  TP NYALWY YV Q  P+L  +MD ++  +  C
Sbjct: 1   MSKDLLREAAINLKRAVPLMLKHQIPTTPTNYALWYAYVGQQNPELITKMDRIVNEYNTC 60

Query: 62  PPASGEHLYQQYIATKAETNINQLRANVEVLLGEISSSMSDTLSDTSSFANVIDKSFKDL 121
           PP + E LY+++IA  +E N+  +R N+E +  E+S S+ DT  D + F   +D +F  L
Sbjct: 61  PPVTAELLYREHIADPSEVNVLNMRQNLEAMTIELSQSIKDTNQDATVFQQRVDSNFNRL 120

Query: 122 ERVEQDNLSIEEVMTVIRRLVSDSKDIRHSTNFLNNQLNAATLEISRLKEQLAKVQKDAL 181
            R+E++ LS+E+V+ ++R LV +S DIR ST +   +L+ A  EI+ L+E L + ++D  
Sbjct: 121 NRIEEEGLSLEKVLGLVRDLVKESDDIRQSTEYFTGRLDKAQEEIAALREALKRSEQDVY 180

Query: 182 FDSLSGLYNRRAFDGDMFTLI-HAGQQVSLIMLDIDHFKALNDNYGHLFGDQIIRAIAKR 240
            D+L+G  NRRAFD D+  L+  + +   LI+ D+DHFK+ ND YGH  GD +++A+AKR
Sbjct: 181 HDALTGALNRRAFDQDLKGLLAQSPEGTCLILADVDHFKSFNDTYGHHLGDNVLKAVAKR 240

Query: 241 LQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSIEKLTVKDRRSGQSVGSIT 300
           L   CRDGV  YRYGGEEFALI P+   R AR  A+++RR++EK+++KDRR  Q++  I+
Sbjct: 241 LNESCRDGVKLYRYGGEEFALIVPNSHQRKARHLADAMRRTLEKISLKDRRKNQTIDKIS 300

Query: 301 ASFGVVEKIEGDSLESLIGRADGLLYEAKNLGRNRVMPL 339
           ASFGV E    D+ ESLI R DG LY+AK LGRNRVMPL
Sbjct: 301 ASFGVSEWQAKDTFESLIERTDGFLYDAKRLGRNRVMPL 339