Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  105 bits (261), Expect = 4e-27
 Identities = 78/226 (34%), Positives = 121/226 (53%), Gaps = 18/226 (7%)

Query: 123 RVEQDNLSIEEVMTVIRRLVSDSKDIRHSTNF-LNNQLNAATLEIS----RLKEQLAKVQ 177
           R++Q+ L   +    IR    ++  +   TN  L   +   TLE+      L E   K+ 
Sbjct: 395 RIQQEALKQAQK---IRSAREEALKVEAETNERLEQMVQERTLELEITLRELHEVNQKLT 451

Query: 178 KDALFDSLSGLYNRRAFDGDMFTLIHAGQQ----VSLIMLDIDHFKALNDNYGHLFGDQI 233
           + +  DSL+G+ NR AFD  +       ++    ++L+MLDID FK++ND +GHL GDQ 
Sbjct: 452 EQSTIDSLTGVKNRSAFDKRLLAESRISRRQETPIALLMLDIDRFKSINDQFGHLAGDQA 511

Query: 234 IRAIAKRLQS-LCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSIEKLTVKDRRS 292
           ++ IA  LQ  L R      R+GGEEFA+I P+ +   A Q AES+R ++  + +     
Sbjct: 512 LKVIATTLQQHLKRPTDLVSRFGGEEFAIILPNTTAEGAIQVAESIRDAVTSIGL--AWE 569

Query: 293 GQSVGSITASFGVVEKIEGDSLES--LIGRADGLLYEAKNLGRNRV 336
           G+ +  +T S GV   +  +   S  L+ +AD  LY+AKN GRN+V
Sbjct: 570 GKPI-PLTVSIGVSADVISNDQHSTELLEQADKALYQAKNSGRNQV 614