Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  348 bits (893), Expect = e-100
 Identities = 170/339 (50%), Positives = 235/339 (69%), Gaps = 1/339 (0%)

Query: 2   MTTEDFKKSTANLKKVVPLMMKHHVAATPVNYALWYTYVDQAIPQLNAEMDSVLKNFGLC 61
           M+ +  + +  NLKK VPLM+KH +  TP+NYALWYTYV +  P LNA++D+V+ ++  C
Sbjct: 1   MSRDLLQTAALNLKKAVPLMLKHQIPTTPINYALWYTYVGEQNPALNAQLDTVIAHYNTC 60

Query: 62  PPASGEHLYQQYIATKAETNINQLRANVEVLLGEISSSMSDTLSDTSSFANVIDKSFKDL 121
           PP S E L++QY+A   E ++  +R N+E +  E+S S+ DT  D + F   I+ +F  L
Sbjct: 61  PPVSSELLFRQYVADPVELDVRDMRLNLEAMATELSQSIRDTNLDATEFQTCINTNFAKL 120

Query: 122 ERVEQDNLSIEEVMTVIRRLVSDSKDIRHSTNFLNNQLNAATLEISRLKEQLAKVQKDAL 181
             +E+  LS+E+V+ ++R LV +S++IR ST +  +QL  A  EI  LK++L K +KD L
Sbjct: 121 NGIEEGALSVEQVLDLVRNLVKESENIRSSTEYFTSQLQKAQTEIDALKQKLEKSEKDVL 180

Query: 182 FDSLSGLYNRRAFDGDMF-TLIHAGQQVSLIMLDIDHFKALNDNYGHLFGDQIIRAIAKR 240
           +D+L+G  NRRAFD D+   L  A +   LI++DIDHFKA NDNYGH  GDQ+++A++KR
Sbjct: 181 YDALTGCLNRRAFDADLAGMLAQAPEGTCLILVDIDHFKAFNDNYGHQLGDQVLKAVSKR 240

Query: 241 LQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSIEKLTVKDRRSGQSVGSIT 300
           LQ  CRDG   YR+GGEEFA+I P   LRIARQ AE++RR +EKL++KDRR  Q + +IT
Sbjct: 241 LQEACRDGCKLYRFGGEEFAIIVPKSQLRIARQLAEAMRRGLEKLSLKDRRKDQRIDNIT 300

Query: 301 ASFGVVEKIEGDSLESLIGRADGLLYEAKNLGRNRVMPL 339
           ASFGV +  E      LI RAD LLYEAK LGRNRVMP+
Sbjct: 301 ASFGVAQWQEKQVAIHLIERADMLLYEAKRLGRNRVMPM 339