Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  163 bits (412), Expect = 7e-45
 Identities = 101/340 (29%), Positives = 170/340 (50%), Gaps = 13/340 (3%)

Query: 4   TEDFKKSTANLKKVVPLMMKHHVAATPVNYALWYTYVDQAIPQLNAEMDSVLKNFGLCPP 63
           T++   +   L+  VP M    +  TP NY +WY Y  Q    LN  +D  L N  +   
Sbjct: 7   TKELDSAAQILRLAVPQMSALDIPVTPENYTVWYEYFAQTNLDLNRAIDGFLANKVVFTK 66

Query: 64  ASGEHLYQQYIATKAETNINQLRANVEVLLGEISSSMSDTLSDTSSFANVIDKSFKDLER 123
                LY+ +I  K+   I  ++   ++L+  + S ++     T +F++ +     D   
Sbjct: 67  EVNTSLYKNFIQEKSPEVIENVQIETQILINSLISKITQLNQGTEAFSSTL----ADFGL 122

Query: 124 VEQDNLSIEEVMTVIRRLVSDSKDIRHSTNFLNNQLNAATLEISRLKEQLAKVQKDALFD 183
             Q    +  +  ++  ++ + + +  +   +   L+A   E+  LK ++  +   A+ D
Sbjct: 123 QLQTKPDVCTLNQLVDGVIDEMQSLLVNNQTMEQSLSAMGQEVQNLKTEMENLSLAAMTD 182

Query: 184 SLSGLYNRRAFDGDMFTLIHAGQQ----VSLIMLDIDHFKALNDNYGHLFGDQIIRAIAK 239
            L+ L+NRRA++  +   IH  +Q     SL+++DID FK  NDNYGH  GD+++  +A 
Sbjct: 183 QLTSLHNRRAYEIAIQDHIHRAEQQHTRCSLLLIDIDRFKVFNDNYGHQVGDKVLAYVAL 242

Query: 240 RLQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRRSIEKLTV---KDRRSGQSV 296
            L+   R      RYGGEEF ++ P+     A Q AE++R  I +  +   KD++   S+
Sbjct: 243 ALKQCVRGDDFVARYGGEEFVVLLPNTHFHDALQVAETLRERISERRLAIGKDKK--LSL 300

Query: 297 GSITASFGVVEKIEGDSLESLIGRADGLLYEAKNLGRNRV 336
           G+IT S G+    EGD  ++L  RAD  LYEAK+ GRN V
Sbjct: 301 GAITVSIGLASLQEGDDADTLFSRADKALYEAKSDGRNCV 340