Pairwise Alignments

Query, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 578 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  102 bits (255), Expect = 2e-26
 Identities = 71/187 (37%), Positives = 98/187 (52%), Gaps = 8/187 (4%)

Query: 156 NNQLNAATLEISRLKEQLAKVQKDALFDSLSGLYNRRAFDGDMFT-LIHAGQQ---VSLI 211
           N +L      +  LK   A+V+  A  D L+G YNRR  D  +   LI+A      +S++
Sbjct: 381 NLELQQMVSSLETLKTYAAQVKAMAETDGLTGCYNRRYLDSQIQKELIYANDHNMPLSIV 440

Query: 212 MLDIDHFKALNDNYGHLFGDQIIRAIAKRLQS-LCRDGVTAYRYGGEEFALIAPHKSLRI 270
           M DID+FK  ND YGH+ GDQ ++ I    +S L R      RYGGEEF L+ P   L  
Sbjct: 441 MFDIDNFKQFNDRYGHVLGDQCLKQIVNAAKSILQRPTDILARYGGEEFMLLLPSSHLED 500

Query: 271 ARQFAESVRRSIEKLTVKDRRSGQSVGSITASFGVV--EKIEGDSLESLIGRADGLLYEA 328
           A + AE +R++I  L +    S  S G +T S GV   +  +      L+ +AD  LY+A
Sbjct: 501 AYKIAERLRKAIIALHIPHEDSSHS-GLVTISLGVACWQPSQLIDTNRLLCQADEALYQA 559

Query: 329 KNLGRNR 335
           K  GRNR
Sbjct: 560 KQQGRNR 566