Pairwise Alignments

Query, 306 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Chemotaxis protein CheV (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  172 bits (436), Expect = 9e-48
 Identities = 104/292 (35%), Positives = 165/292 (56%), Gaps = 4/292 (1%)

Query: 11  SQGMLMFTLSAQQQLFAIGTLKVREIVTYQPMTQIPYSHHHVIGTVTIRNLTVPVIDMAA 70
           S  +L+FTL + + L AI  LKV EI+   P+T++P SH HV G  T+R  ++ VID++ 
Sbjct: 10  SLSLLLFTLRSGK-LMAINLLKVSEIIPCPPLTKLPESHPHVKGIATLRGTSLSVIDLSR 68

Query: 71  AIGFRPIQPSEYQKCYLIVTDCLRTVVAFMVRTIEKIIECDWRQIESSPE-TAGHDVFVT 129
           AIG RP++  +   C LIVTD  R+     V+ + KI+ C    I+  P  + G   F+T
Sbjct: 69  AIGERPLEDPD-GGC-LIVTDVSRSKQGLHVQAVSKIVHCLTTDIKPPPYGSGGVRSFIT 126

Query: 130 GITRFQNKIVQLLDVELLLSKIYPQYESTKVPMLTDIERERLKPLNILLVDDSSIARKQL 189
           G+T     +VQ+LD+E ++  I P    T    L+  + E L    IL+VDDS +A +Q 
Sbjct: 127 GVTSVDGTLVQVLDIEKVIHGIAPAQIETAPTELSMEDAEVLGNARILVVDDSQVALQQS 186

Query: 190 SDALDSINIPYHICKNGSEALDLMRDMARDHRAIDILVSDIEMPGLDGYELAFEMQNDPQ 249
              L ++ +  H  ++  EA+D + ++    + I+++VSDIEM  +DGY L   ++  P 
Sbjct: 187 VHTLRNLGLQCHTARSAKEAIDCLLELQGTAQEINLIVSDIEMSEMDGYALTRTLRETPD 246

Query: 250 LNHAYCILHTSLSSEICVDRAHQVGAHEALEKFNATELVEAMLRGAKKLQTQ 301
             H Y +LHTSL S +  ++A   GA+  L KF++ EL + ++  AK +  Q
Sbjct: 247 FAHLYVLLHTSLDSAMNSEKARLAGANGVLTKFSSPELTKYLITAAKAVAEQ 298