Pairwise Alignments

Query, 306 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., chemotaxis protein CheW from Pseudomonas fluorescens FW300-N2C3

 Score =  169 bits (428), Expect = 8e-47
 Identities = 90/283 (31%), Positives = 162/283 (57%), Gaps = 7/283 (2%)

Query: 14  MLMFTLSAQQQLFAIGTLKVREIVTYQPMTQIPYSHHHVIGTVTIRNLTVPVIDMAAAIG 73
           +L+F L  QQ ++ I   KVRE++    +T +P S   V G   IR  T+P++D+A A G
Sbjct: 22  LLLFRLDGQQ-MYGINVFKVREVLQCPKLTLMPKSSPVVCGVANIRGATIPILDLAMATG 80

Query: 74  FRPIQPSEYQKCYLIVTDCLRTVVAFMVRTIEKIIECDWRQIESSPETAGHDVFVTGITR 133
              +   +    ++I+T+       F+VR++E+I+  +W +I   P+  G D ++T +TR
Sbjct: 81  SGRLL--DQSNPFVIITEYNTKTQGFLVRSVERIVNMNWEEIHPPPKGTGRDHYLTAVTR 138

Query: 134 FQNKIVQLLDVELLLSKIYPQYESTKVPMLTDIERERLKPLNILLVDDSSIARKQLSDAL 193
             N++V+++DVE +L+++ P  E+    ++    + +   L +L VDDSS+ARKQ++  L
Sbjct: 139 VDNQLVEIIDVEKILAEVAPTPEAISAGVVDAETQHKAISLRVLTVDDSSVARKQVTRCL 198

Query: 194 DSINIPYHICKNGSEALDLMRDMARDHRAID----ILVSDIEMPGLDGYELAFEMQNDPQ 249
            ++ +      +G +ALD +R +  + +  +    +++SDIEMP +DGY L  E+++DP+
Sbjct: 199 QTVGVEVVALNDGRQALDYLRALVDEGKKPEEEFLMMISDIEMPEMDGYTLTSEIRSDPR 258

Query: 250 LNHAYCILHTSLSSEICVDRAHQVGAHEALEKFNATELVEAML 292
           +   + ILHTSLS         +VGA + L KF   +L   ++
Sbjct: 259 MQKLHIILHTSLSGVFNQAMVKKVGADDFLAKFRPDDLASRVV 301