Pairwise Alignments

Query, 306 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 928 a.a., CheA signal transduction histidine kinase from Synechococcus elongatus PCC 7942

 Score = 56.6 bits (135), Expect = 2e-12
 Identities = 66/253 (26%), Positives = 107/253 (42%), Gaps = 25/253 (9%)

Query: 60  NLTVPVIDMAAAIGFR-PIQPSEYQKCY-------LIVTDCLRTVVAFMVRTIEKIIECD 111
           NL++PV  +++ + F  P   S Y           ++V       +A     IE   E  
Sbjct: 682 NLSLPVFPLSSLLDFHLPFGRSRYYNSLGDDGVVSIVVLRNDNEYLAVQTDQIEGEREIV 741

Query: 112 WRQIESSPETAGHDVFVTGIT-RFQNKIVQLLDVELLLSKIYPQYESTKVPMLTDIE--- 167
            +QIE         + + GIT R   +++ ++DV  L    Y +    +V  +       
Sbjct: 742 IKQIEGP---IAKPLGILGITVRSDGQVMPIVDVLELFDIAYGRVRQRQVAPVAPSAGET 798

Query: 168 RERLKPLNILLVDDSSIARKQLSDALDSINIPYHICKNGSEALDLMRDMARDHRAIDILV 227
           R   +P+ +L+VDDS   R+ LS             +NG EAL+ +          D++ 
Sbjct: 799 RTNTEPM-VLIVDDSITVRELLSMTFKKAGYVVEQARNGQEALEKLYSGL----PCDLVF 853

Query: 228 SDIEMPGLDGYELAFEMQNDPQLNHAYCILHTSLSSEICVDRAHQVGAH-EALEKFNATE 286
            DIEMP ++G EL   +Q DP+L      + TS  +    DR  Q+ AH  A   F    
Sbjct: 854 CDIEMPKMNGLELLERLQADPKLRSLPVAMLTSRGA----DRHRQIAAHLGARAYFTKPY 909

Query: 287 LVEAMLRGAKKLQ 299
           L E +L  + +L+
Sbjct: 910 LEEQLLEASARLR 922