Pairwise Alignments

Query, 306 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella loihica PV-4

 Score =  158 bits (399), Expect = 2e-43
 Identities = 103/317 (32%), Positives = 175/317 (55%), Gaps = 22/317 (6%)

Query: 1   MAKVVSKANQSQGM--------LMFTLSAQQQLFAIGTLKVREIVTYQPMTQIPYSHHHV 52
           MAKV+   +Q   +        L+F ++A Q LFAI   KV+E+V    ++ +P SH  +
Sbjct: 1   MAKVLESVDQRTQLVGENRLELLLFRINATQ-LFAINVFKVKEVVKLPKLSALPGSHPSI 59

Query: 53  IGTVTIRNLTVPVIDMAAAIGFRPIQPSEYQKCYLIVTDCLRTVVAFMVRTIEKIIECDW 112
            G   IR  ++PVID+ AAIGF+P+     Q+  LI+T+  R+V  FMV  ++ II   W
Sbjct: 60  KGVANIRGTSIPVIDLRAAIGFQPMNSD--QEANLIITEYNRSVQGFMVGKVDHIINMTW 117

Query: 113 RQIESSPETAGHDVFVTGITRFQ----NKIVQLLDVELLLSKIYPQYESTKVPMLTDIER 168
             I   P++ G   ++T IT+ +     ++V ++DVE +L++I     +    +L +   
Sbjct: 118 SDIMPPPKSTGSHNYLTAITKVEVDGATRLVSIIDVEKVLAEIVHYDIAISEGVLDEALV 177

Query: 169 ERLKPLNILLVDDSSIARKQLSDALDSINIPYHICKNGSEALDLMR---DMARD-HRAID 224
           +++    IL+ DDS+ AR+Q+ D L  + I      +G +AL L++   D  RD ++ I 
Sbjct: 178 DKMIGRKILIADDSATARRQVKDTLAPLGIEVIETSDGLQALKLLKRWCDEGRDINQEIL 237

Query: 225 ILVSDIEMPGLDGYELAFEMQNDPQLNHAYCILHTSLSSEICVDRAHQVGAHEALEKFNA 284
           +L++D EMP +DGY L +E++ND ++ + +  L+TSLS         +VG    + KF  
Sbjct: 238 MLITDAEMPEMDGYRLTYEVRNDKRMANLFITLNTSLSGSFNNAMVEKVGCDRFISKFQP 297

Query: 285 TELVEAMLRGAKKLQTQ 301
             LV+ +    ++L+TQ
Sbjct: 298 DLLVDVV---QERLRTQ 311