Pairwise Alignments

Query, 306 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella loihica PV-4

 Score =  367 bits (943), Expect = e-106
 Identities = 182/294 (61%), Positives = 233/294 (79%), Gaps = 1/294 (0%)

Query: 6   SKANQSQGMLMFTLSAQQQLFAIGTLKVREIVTYQPMTQIPYSHHHVIGTVTIRNLTVPV 65
           SKA+QSQG+L+F LS   QLFA+GTLK+RE+V +  ++ IP SH  ++G  T+R  T+P+
Sbjct: 20  SKASQSQGLLLFRLS-HTQLFALGTLKIRELVPFSKLSAIPQSHPAILGAATVRGHTIPI 78

Query: 66  IDMAAAIGFRPIQPSEYQKCYLIVTDCLRTVVAFMVRTIEKIIECDWRQIESSPETAGHD 125
           IDMAAA+G+ PI P E    Y+I+TDC R V+ F+VR+I+KIIEC+WR IES P+  G +
Sbjct: 79  IDMAAAVGYAPITPEECANAYIIITDCQRMVMGFLVRSIDKIIECNWRDIESPPDNLGKN 138

Query: 126 VFVTGITRFQNKIVQLLDVELLLSKIYPQYESTKVPMLTDIERERLKPLNILLVDDSSIA 185
            F+TG+TR  +K+VQLLDVELLLSKI+P    T   +LTD++RE LKPLNILLVDDS +A
Sbjct: 139 AFLTGVTRVDDKLVQLLDVELLLSKIFPASPDTTRAILTDVQREILKPLNILLVDDSMVA 198

Query: 186 RKQLSDALDSINIPYHICKNGSEALDLMRDMARDHRAIDILVSDIEMPGLDGYELAFEMQ 245
           RKQLSDALDSINIPY +  +G +AL +M + A++ R +D+LVSDIEMPGLDGYELAFE++
Sbjct: 199 RKQLSDALDSINIPYLVTSDGRDALSIMEEAAKEGRPVDLLVSDIEMPGLDGYELAFEVK 258

Query: 246 NDPQLNHAYCILHTSLSSEICVDRAHQVGAHEALEKFNATELVEAMLRGAKKLQ 299
           N P L  AY ILHTSLSSEI V +AHQVGA+EAL KF+A EL++AMLRGAK+ Q
Sbjct: 259 NTPALADAYIILHTSLSSEISVSQAHQVGANEALTKFDAHELIDAMLRGAKRHQ 312