Pairwise Alignments

Query, 306 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella loihica PV-4

 Score =  184 bits (466), Expect = 3e-51
 Identities = 99/282 (35%), Positives = 173/282 (61%), Gaps = 7/282 (2%)

Query: 14  MLMFTLSAQQQLFAIGTLKVREIVTYQPMTQIPYSHHHVIGTVTIRNLTVPVIDMAAAIG 73
           +L+F L+ +Q+ F I   KV+E++   P+T +P  + +V G   IR  T+ VID++AA G
Sbjct: 22  LLLFKLNGRQR-FGINVFKVKEVLQCPPLTGLPKLNPYVRGVAHIRGQTISVIDLSAATG 80

Query: 74  FRPIQPSEYQKCYLIVTDCLRTVVAFMVRTIEKIIECDWRQIESSPETAGHDVFVTGITR 133
            RPI+ +E   C++I+++  R+V  F+V+++E+II  +W  I   P+ AG   ++T +T 
Sbjct: 81  GRPIEDTE--GCFIIISEYNRSVQGFLVKSVERIINMNWEAIMPPPQGAGRYSYLTAVTE 138

Query: 134 FQNKIVQLLDVELLLSKIYPQYESTKVPMLTDIERERLKPLNILLVDDSSIARKQLSDAL 193
            + ++V++LDVE +L +I P        +   +  +R +  +I+++DDS++ARKQ+  AL
Sbjct: 139 IEGELVEILDVEKILDEISPVKTQISQEVDEQLTIDRERHYHIMVIDDSAVARKQIIRAL 198

Query: 194 DSINIPYHICKNGSEALDLMRDMARD----HRAIDILVSDIEMPGLDGYELAFEMQNDPQ 249
           +S+++     K+G EALD +  +A +       I +++SDIEMP +DGY L  E++++P+
Sbjct: 199 ESLSLQIDTAKDGREALDKLVSVAAEMDNVAHEIPLIISDIEMPEMDGYTLTAEIRDNPK 258

Query: 250 LNHAYCILHTSLSSEICVDRAHQVGAHEALEKFNATELVEAM 291
           L     +LHTSLS         +VGA++ + KFN  EL  A+
Sbjct: 259 LKDIKVVLHTSLSGVFNQAMVEKVGANDFIAKFNPDELAAAV 300