Pairwise Alignments

Query, 306 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., chemotaxis protein CheV (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  188 bits (477), Expect = 2e-52
 Identities = 99/282 (35%), Positives = 174/282 (61%), Gaps = 7/282 (2%)

Query: 14  MLMFTLSAQQQLFAIGTLKVREIVTYQPMTQIPYSHHHVIGTVTIRNLTVPVIDMAAAIG 73
           +L+F L+ +Q+ F I   KV+E++   P+T +P  + +V G   IR  T+ VID++AA G
Sbjct: 22  LLLFKLNGRQR-FGINVFKVKEVLQCPPLTTLPKLNPYVKGVAHIRGTTISVIDLSAATG 80

Query: 74  FRPIQPSEYQKCYLIVTDCLRTVVAFMVRTIEKIIECDWRQIESSPETAGHDVFVTGITR 133
            RP+  +E   C++I+++  R+V  F+V ++E+II  +W  I   P+ AG   ++T +T 
Sbjct: 81  GRPLASTE--NCFIIISEYNRSVQGFLVSSVERIINMNWEAIMPPPQGAGRYSYLTAVTE 138

Query: 134 FQNKIVQLLDVELLLSKIYPQYESTKVPMLTDIERERLKPLNILLVDDSSIARKQLSDAL 193
            + ++V++LDVE +L +I P   +    +   +  +R +  +I+++DDS++ARKQ+  +L
Sbjct: 139 IEGELVEILDVEKILDEISPVKTAISEEVNQQLTIDRTQHYHIMVIDDSAVARKQIIRSL 198

Query: 194 DSINIPYHICKNGSEALDLMRDMARDHR----AIDILVSDIEMPGLDGYELAFEMQNDPQ 249
           +S+N+     K+G EALD ++ +A +       I +++SDIEMP +DGY L  E+++DP+
Sbjct: 199 ESLNLQIDTAKDGREALDKLKAIASEMNNVADEIPLIISDIEMPEMDGYTLTAEIRDDPK 258

Query: 250 LNHAYCILHTSLSSEICVDRAHQVGAHEALEKFNATELVEAM 291
           L +   +LHTSLS         +VGA++ + KFN  EL  A+
Sbjct: 259 LKNIKVVLHTSLSGVFNQAMVQKVGANDFIAKFNPDELAAAV 300