Pairwise Alignments

Query, 306 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., chemotaxis protein CheV (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  374 bits (961), Expect = e-108
 Identities = 183/291 (62%), Positives = 232/291 (79%), Gaps = 1/291 (0%)

Query: 6   SKANQSQGMLMFTLSAQQQLFAIGTLKVREIVTYQPMTQIPYSHHHVIGTVTIRNLTVPV 65
           SKANQSQG+L+F LS Q Q+FA+GTLK+RE+V Y P+++IP SH  ++G  TIR  T+PV
Sbjct: 3   SKANQSQGLLLFRLS-QHQIFALGTLKIRELVPYTPLSKIPQSHPTILGAATIRGHTIPV 61

Query: 66  IDMAAAIGFRPIQPSEYQKCYLIVTDCLRTVVAFMVRTIEKIIECDWRQIESSPETAGHD 125
           +DMAAAIG+RP+   E Q CY+I+TDC R ++ F+VR I+KIIEC+WR IE+     G +
Sbjct: 62  VDMAAAIGYRPVSDEERQHCYIIITDCQRMIIGFLVRAIDKIIECNWRDIEAPSANLGKN 121

Query: 126 VFVTGITRFQNKIVQLLDVELLLSKIYPQYESTKVPMLTDIERERLKPLNILLVDDSSIA 185
            F+TG+TR+ N++VQLLDVELLLSK++P        +LTD++RE+LKP  ILLVDDS +A
Sbjct: 122 AFLTGVTRYDNQLVQLLDVELLLSKVFPDAPEANRAILTDVQREKLKPRRILLVDDSKVA 181

Query: 186 RKQLSDALDSINIPYHICKNGSEALDLMRDMARDHRAIDILVSDIEMPGLDGYELAFEMQ 245
           RKQLSDALDSINIPY +  +G EAL +M   A +H  IDILVSDIEMPGLDGYELAFE++
Sbjct: 182 RKQLSDALDSINIPYFVTPDGREALSIMEQAAAEHHPIDILVSDIEMPGLDGYELAFEVR 241

Query: 246 NDPQLNHAYCILHTSLSSEICVDRAHQVGAHEALEKFNATELVEAMLRGAK 296
           ++P L +AY ILHTSLSSEI V +AHQVGA+EAL KF+A ELVEAMLRGA+
Sbjct: 242 DNPLLANAYIILHTSLSSEISVSQAHQVGANEALTKFDAHELVEAMLRGAE 292