Pairwise Alignments

Query, 306 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 178 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 53.9 bits (128), Expect = 3e-12
 Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 8/138 (5%)

Query: 18  TLSAQQQLFAIGTLKVREIVTYQPMTQIPYSHHHVIGTVTIRNLTVPVIDMAAAIGFRPI 77
           T  +    FAIG L V+EI+  + +T++P     + G + +R   VPVID++  +G R  
Sbjct: 21  TFQSANDTFAIGILDVKEIIEIEGITRVPMMPEFLCGIINLRGKVVPVIDLSKRLG-RLT 79

Query: 78  QPSEYQKCYLIVT---DCLRTVVAFMVRTIEKIIECDWRQIESSPETAGHDV---FVTGI 131
                + C ++V    +  R  +  +V  + +I+E D    +  P+  G D+   F+  +
Sbjct: 80  TVISKKSCIVLVEVSHEDERQTIGMLVDEVNEILEIDDEHTQPPPD-FGADLRVDFIRAM 138

Query: 132 TRFQNKIVQLLDVELLLS 149
            R     + LLD+  +LS
Sbjct: 139 GRVGEHFMILLDINYVLS 156