Pairwise Alignments

Query, 306 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., chemotaxis protein CheV (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  169 bits (429), Expect = 6e-47
 Identities = 99/293 (33%), Positives = 169/293 (57%), Gaps = 11/293 (3%)

Query: 14  MLMFTLSAQQQLFAIGTLKVREIVTYQPMTQIPYSHHHVIGTVTIRNLTVPVIDMAAAIG 73
           +L+F +++ Q LFAI   KV+E+V   P+  +P SH H+ G   IR +++PVID+ +AIG
Sbjct: 22  LLLFRINSMQ-LFAINVFKVKEVVKLPPLNAMPGSHPHISGVANIRGMSIPVIDLRSAIG 80

Query: 74  FRPIQPSEYQKCYLIVTDCLRTVVAFMVRTIEKIIECDWRQIESSPETAGHDVFVTGITR 133
           F+P+ P +     +I+T+  R+V  F+V  +E II   W  I   P+TAG + ++T ITR
Sbjct: 81  FKPVPPDD--TANMIITEYNRSVQGFLVGKVEHIINMTWSDIMPPPKTAGRNNYLTAITR 138

Query: 134 F----QNKIVQLLDVELLLSKIYPQYESTKVPMLTDIERERLKPLNILLVDDSSIARKQL 189
                Q+++V ++DVE +L++I     S    +L +   +++    IL+VDDSS AR+Q+
Sbjct: 139 IDYQGQSQLVSIIDVEKVLAEIVHYDISLSEGVLDESLLDKMPGRKILIVDDSSTARRQV 198

Query: 190 SDALDSINIPYHICKNGSEALDLM---RDMARD-HRAIDILVSDIEMPGLDGYELAFEMQ 245
            + L  + I      +G +AL L+   RD  ++  + + ++++D EMP +DGY+L +E++
Sbjct: 199 RETLGQLGIEIIEASDGLQALHLLQKWRDEGKNVTKELLMMITDAEMPEMDGYKLTYEVR 258

Query: 246 NDPQLNHAYCILHTSLSSEICVDRAHQVGAHEALEKFNATELVEAMLRGAKKL 298
           ND  +   +  L+TSLS         +VG    + KF    LVE +    K++
Sbjct: 259 NDKAMADLFITLNTSLSGSFNNAMVEKVGCDRFISKFQPDLLVEVVQDRLKQI 311