Pairwise Alignments

Query, 224 a.a., helix-turn-helix transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 216 a.a., Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain from Pseudomonas stutzeri RCH2

 Score = 82.8 bits (203), Expect = 5e-21
 Identities = 50/158 (31%), Positives = 81/158 (51%), Gaps = 9/158 (5%)

Query: 68  VLTDYSSFKHISC-------PDAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIK 120
           +L D +SF    C        DA   +IN   D   +L+     + GVFY     +  ++
Sbjct: 57  ILLDVASFDRDECIHLLRQVGDAPVALINAQPDQARRLVETHPWIRGVFYRATPRNIFVR 116

Query: 121 GMSKILQDEMWLTRKLAQEYILHYRAGNSVVTSQMYAKLTKREQQIIKLLGSGASNIEIA 180
           G+  +L    WL R+L +  +  YR  ++  + Q+  +LT RE+QI+ L G G SN  I 
Sbjct: 117 GVQAMLAGGDWLPRQLMETLLCRYRQLSN--SHQVIDELTLREKQILALAGQGLSNAAIG 174

Query: 181 DKLFVSENTVKTHLHNVFKKINAKNRLQALIWAKNNIG 218
           +KL +S +T+K+H+HN  +K+ A NR Q       ++G
Sbjct: 175 EKLHLSIHTIKSHVHNALRKLGASNRAQGASLVLAHVG 212