Pairwise Alignments

Query, 224 a.a., helix-turn-helix transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 66.6 bits (161), Expect = 4e-16
 Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 24/221 (10%)

Query: 1   MKDENKLNVRMLSDVCMQSRLLKEALESKLPLALEITPFSELWLEENKPESRSIQMLV-- 58
           MK EN LNV +  D  +    L++AL S              W E +  ++  +Q L+  
Sbjct: 16  MKLEN-LNVIIADDHPLFRNALRQALSSAFA--------DTRWFEADSADA--LQQLLDK 64

Query: 59  --IDYSRISDDVLTD----YSSFKHISC--PDAKEVIINCPQDIEHKLLFKWNNLAGVFY 110
             +DY  +  D+       YS+  H+    PD   V+I+  +D +          AG   
Sbjct: 65  PEVDYDLVLLDLQMPGSHGYSTLIHLRSHYPDIPVVVISAHEDAQTISRAIHYGSAGFIP 124

Query: 111 IDDDMDTLIKGMSKILQDEMWLTRKLAQEYILHYRAGNSVVTSQMYAKLTKREQQIIKLL 170
               M+TL + MS +L  ++WL + +  E +     G   V  ++ A LT ++ +++++ 
Sbjct: 125 KSASMETLTEAMSAVLYGDIWLPQDI--ELVKIEEDGTDQVAGKL-ADLTPQQYRVLQMF 181

Query: 171 GSGASNIEIADKLFVSENTVKTHLHNVFKKINAKNRLQALI 211
             G  N +IA  L VSE T+K H   +F+K+  +NR QA+I
Sbjct: 182 AEGLLNKQIAYDLGVSEATIKAHATAIFRKLGVRNRTQAVI 222