Pairwise Alignments

Query, 224 a.a., helix-turn-helix transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., LuxR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 82.4 bits (202), Expect = 6e-21
 Identities = 67/212 (31%), Positives = 114/212 (53%), Gaps = 26/212 (12%)

Query: 15  VCMQSRLLKEALESKLPLAL-----EITPFS-ELWLEENKPESRSIQMLVIDYSRISDDV 68
           V  +S+LL + LE++ P        ++TP S E+ + E      +  ++VID + I  DV
Sbjct: 9   VVSRSQLLIDLLETRWPQEFLVKLAKVTPESVEVTMSEG-----NYSLVVIDLATI--DV 61

Query: 69  LTDYSSFKHISCP-DAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIKGMSKILQ 127
              Y   K I     A+ V ++ P+ I+ + L      A VFY D  ++ + K ++ +L+
Sbjct: 62  QRAYQVQKQIEKRHSARVVFLHYPKQIDARFLIS-PITAAVFYGDASLEHIGKVLANVLR 120

Query: 128 DEMWLTRKLAQEYILHYRAGNSVVTSQMYA--KLTKREQQIIKLLGSGASNIEIADKLFV 185
                     Q  I H     S    Q+     LT RE+++++ L SG++N++IA++LFV
Sbjct: 121 ---------GQTVIPHALLSASADQEQLDGADNLTIREREVLQALLSGSTNVDIANQLFV 171

Query: 186 SENTVKTHLHNVFKKINAKNRLQALIWAKNNI 217
           SE+T+KTHL+ VF+KI   +R QA+ WA+ ++
Sbjct: 172 SESTIKTHLYRVFRKIGVSSRGQAIAWAQTHL 203