Pairwise Alignments

Query, 224 a.a., helix-turn-helix transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., DNA-binding nitrate/nitrite response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 59.3 bits (142), Expect = 5e-14
 Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 3/110 (2%)

Query: 107 GVFYIDDDMDTLIKGMSKILQDEMWLTRKLAQEYILHYRAGNSVVTSQMYAKLTKREQQI 166
           G    D + D L+  +   +     ++ ++A EY+  Y   N+    +  + LT RE QI
Sbjct: 103 GYLLKDTEPDLLLDKLKNTMSGHRVISEEVA-EYL--YELKNAADEQEWVSSLTPRELQI 159

Query: 167 IKLLGSGASNIEIADKLFVSENTVKTHLHNVFKKINAKNRLQALIWAKNN 216
           ++ L  G SN  I++ L +SE TVK H+ N+ +K NAK+R +  +   NN
Sbjct: 160 LQQLAEGLSNRMISEHLHISEGTVKVHVKNLLRKANAKSRTEMAVRYLNN 209