Pairwise Alignments

Query, 224 a.a., helix-turn-helix transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 217 a.a., transcriptional regulator CsgD from Klebsiella michiganensis M5al

 Score = 94.7 bits (234), Expect = 1e-24
 Identities = 59/174 (33%), Positives = 99/174 (56%), Gaps = 6/174 (3%)

Query: 47  NKPESRSI---QMLVIDYSRISDDVLTDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWN 103
           NKP ++ +    +++ D +  +  + + +     +   + + +IIN  Q  E   + +W 
Sbjct: 45  NKPLAQRLLKDSVILFDIAVSNKKLNSVWRDIIRMQADNPRLLIINSAQKYELYEMAQWP 104

Query: 104 NLAGVFYIDDDMDTLIKGMSKILQDEMWLTRKLAQEYILHYRAGNSVVTSQMYAKLTKRE 163
            L GVF  DDD   LI+G+  +L  E   T +L+  +   Y A + V      + LT+RE
Sbjct: 105 ALYGVFRHDDDESRLIEGVKAVLNGEQ--TAELSVMHPAMY-AADHVSAPAENSPLTERE 161

Query: 164 QQIIKLLGSGASNIEIADKLFVSENTVKTHLHNVFKKINAKNRLQALIWAKNNI 217
            +I+  L  GA+N++IA  LF+SENTV+THL+NVF+K++ KNR QA+ WA  ++
Sbjct: 162 CEILNELRCGATNLDIARALFISENTVRTHLYNVFRKLSVKNRTQAVSWANEHL 215