Pairwise Alignments

Query, 205 a.a., SM-20 protein from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., SM-20 domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  173 bits (439), Expect = 2e-48
 Identities = 94/198 (47%), Positives = 124/198 (62%), Gaps = 6/198 (3%)

Query: 6   LDGLMDAIADRGWYVWDDFLNPQEVQALRECIP----ERWKRAKIGRNEEIQRAADIRSD 61
           LD + DA+ D+G+    + +     Q L E +        K A IGR  E Q   DIR D
Sbjct: 10  LDVIADALVDKGYIFLPELVPAHISQVLLEKVQATEIHELKAASIGRGAEQQLNPDIRRD 69

Query: 62  KIQWLDLSMGQPVQDYLERMEQIRCEVNRHFFLGLFEYEAHFAKYEAGDFYLKHLDSFRG 121
           +IQWLD    +P   YL+ M Q++  +NR  F+GLF+YE+H+A Y+ G FY KH+D+ +G
Sbjct: 70  RIQWLD-EQHEPDSLYLDLMMQLKEGLNRRLFMGLFDYESHYAVYQPGAFYKKHVDALKG 128

Query: 122 NENRKLTTVFYLNENWTPADGGELKIYDLQDNWIETLAPVAGRLVVFLSERFPHEVLEAH 181
           ++NR LTTVF+LN +W P   GEL I+D  DN IE +AP  G  V+FLSERFPHEV +  
Sbjct: 129 SQNRILTTVFFLNPDWIPEHCGELVIFDEDDNEIEHIAPKMGHFVIFLSERFPHEVTKTL 188

Query: 182 ADRVSIAGWFR-TNGVSG 198
           A R SIAGWFR +N V G
Sbjct: 189 AKRNSIAGWFRVSNSVHG 206