Pairwise Alignments

Query, 373 a.a., maltose/maltodextrin import ATP-binding protein MalK from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., carbohydrate ABC transporter ATP-binding protein, CUT1 family from Pseudomonas syringae pv. syringae B728a

 Score =  350 bits (898), Expect = e-101
 Identities = 187/359 (52%), Positives = 250/359 (69%), Gaps = 7/359 (1%)

Query: 6   LKNVCKAYGDVLISKNVDLEIQEGEFVVFVGPSGCGKSTLLRCIAGLEDITSGDLYIGEQ 65
           L N+ K  G   I ++V LEI  GEFVVFVGPSGCGKSTLLR IAGL+ I +GDL I  +
Sbjct: 5   LDNINKQLGGTRILRDVSLEIAAGEFVVFVGPSGCGKSTLLRLIAGLDSICAGDLLIDGR 64

Query: 66  RMNDVEPSKRGVGMVFQSYALYPHLNLYDNMSFGLKLSKADKSEIKKRVDHAAEILQLSH 125
           R+ND+EP +RGVGMVFQSYALYPH+++YDN+SFGLKL+K +KS +++RV   A+ILQL  
Sbjct: 65  RVNDLEPRERGVGMVFQSYALYPHMSVYDNISFGLKLAKTEKSSLRERVLKTAQILQLDK 124

Query: 126 LLDRQPKALSGGQRQRVAIGRTLVSQPNVFLLDEPLSNLDAALRVQMRSEITKLQRKLGC 185
           LL R+P+ LSGGQRQRVA+GR +  +P++ L DEPLSNLDA+LRVQMR+EI +L ++LG 
Sbjct: 125 LLQRKPRELSGGQRQRVAMGRAMAREPDILLFDEPLSNLDASLRVQMRNEIARLHKRLGS 184

Query: 186 TMIYVTHDQVEAMTMADKIVVLDAGFVSQVGKPLELYHYPQNRFVAGFIGSPKMNFMSVF 245
           TMIYVTHDQVEAMT+ADKIVVL+ G V QVG P ELY  P + FVAGF+GSP+MNF+ V 
Sbjct: 185 TMIYVTHDQVEAMTLADKIVVLNGGQVEQVGSPRELYERPASLFVAGFLGSPRMNFLPVS 244

Query: 246 IEGVEKDRVQVQLSNGTTFWIPVDGTTVTRGERMSLGIRPEHLV--EAEHGDAKIEGKVM 303
           ++   +  + + +       +P D + +T   +++LG+RPEH+    A +G   +   V 
Sbjct: 245 LQAPGRSSL-IDIPALGMKSLPFDSSNLTEDAQLTLGVRPEHITLNAANNG---VGVTVS 300

Query: 304 IVEKLGNETQVYMNLKGSDSDVIYRQPDTLDVETGDTLTIGIPAHRCHLFHSDGRACRR 362
            VE LG+E  V++   G+   +I R       + GD + +       HLF +DG A +R
Sbjct: 301 GVEYLGSEVYVHL-ATGASEPLICRCDAKAGWQVGDQVALQFDDSNLHLFDADGLALKR 358