Pairwise Alignments

Query, 393 a.a., maltose/maltodextrin ABC transporter substrate-binding protein MalE from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., Sugar ABC transporter, periplasmic sugar-binding protein USSDB1B from Xanthomonas campestris pv. campestris strain 8004

 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 84/330 (25%), Positives = 136/330 (41%), Gaps = 43/330 (13%)

Query: 5   LSTVALSTLVALGSFGAHAAIEEGQLTI--WINGDKGYNGLAEVGKKFEADT-GIKVTVA 61
           L  + ++  + LG+ G   + E+GQ T+  W  G K    +AE+  +FE    GIKV V 
Sbjct: 4   LKLMMMAAALCLGAAGCERS-EQGQTTVRFWAMG-KEAEVVAELVDEFERQNPGIKVDVQ 61

Query: 62  H-PDALQDKFPQTAATGDG-PDIVFWAHDRFGGYAEAGLLVEIKPSAKIQEGIVD----- 114
           + P     +   TA   DG PD+    +     +A    L  ++P    +  IVD     
Sbjct: 62  NIPMTAAHEKLLTAFAADGLPDVCQLGNTWLPEFALLDTLEPMQPYVA-RSSIVDPKDYF 120

Query: 115 -FAWDAVKYNGKIIGYPIAVESLSLIYNKDLV-----PNPPKSWEEVAELDAKLKKE--- 165
              WD    +G + G P  V++  L Y KDL+        PK+W E+ ++ A +K+    
Sbjct: 121 PGVWDTNLVDGTLYGVPWYVDTRLLFYRKDLLREAGYTEMPKTWAEMEQVMAAIKRHVGP 180

Query: 166 GKSAIMWNLKEPYFTWPLMAADGGYAFKYGVDGYDVKD----AGINNKGVKDAMNFVKGL 221
            + AI+          PL   +   +F    D   ++D         +G + A+ F   +
Sbjct: 181 DRYAIL---------MPLNEFEQQLSFALQQDDRLLRDHDNYGNFRGEGFRKALGFYDTM 231

Query: 222 VDKGVISPDMDYSVSE--SAFNQGNTAMTINGPWSWGNI---EKSGI--NYGVTTLPKFN 274
             KG      +  VS     F  G  A  ++GPW+       +  G+   +G   LP  N
Sbjct: 232 YQKGWAPKVSETQVSNVWYEFFNGYYAFYLSGPWNVREFKLRQPPGMEGKWGTAPLPGPN 291

Query: 275 GQASKPFVGVLTAGISTASPNKDLAVEFIE 304
           G  +    G  +  I  +S +KD A + IE
Sbjct: 292 GLGA-GIAGGSSLVIFKSSQHKDAAWKLIE 320