Pairwise Alignments

Query, 393 a.a., maltose/maltodextrin ABC transporter substrate-binding protein MalE from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., substrate-binding protein of a sugar uptake ABC transporter system from Sinorhizobium meliloti 1021

 Score = 47.8 bits (112), Expect = 6e-10
 Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 19/283 (6%)

Query: 2   KNALSTVALSTLVALGSFGAHAAIEEGQLTIWINGDKGYNGLAEVG-KKFEA-DTGIKVT 59
           K    T+AL    ALGS  A AA +E     WI      + + E   K++E  + G KVT
Sbjct: 6   KATFLTLALLGSTALGSVAAQAADQE---ISWIYCGDTIDPIHEKYIKEWEGKNPGWKVT 62

Query: 60  --VAHPDALQDKFPQTAATGDGPDIVFWAHDRFGGYAEAGLLVEIKPSAKIQEGIVDFAW 117
             V      QDK    A  G    + +        +AE  L+V +  +   ++G      
Sbjct: 63  PEVVGWAQCQDKATTLAVAGTPVGMAYVGSRALKEFAENELIVPVPMTEDEKKGYYPNIV 122

Query: 118 DAVKYNGKIIGYPIAVESLSLIYNKDLVPN-------PPKSW-EEVAELDAKLKKEGKSA 169
           D V + G   G PIA  + +L +NKDL          PPK+W EE+A   AK  KE    
Sbjct: 123 DTVTFEGTQWGVPIAFSTKALYWNKDLFKQAGLDPEVPPKTWAEEIA--FAKQIKEKTGI 180

Query: 170 IMWNLKEPYFTWPLMAADGGYAFKYGVDGYDVKDAGINNKGVKDAMNFVKGLVDKGVI-S 228
             + L    F    M     + +       D  +  I++  V  A+   K +    V  +
Sbjct: 181 AGYGLPAKTFD-NTMHQFMHWVYTNNGKVIDGDNIVIDSPEVLAALQAYKDITPFSVEGA 239

Query: 229 PDMDYSVSESAFNQGNTAMTINGPWSWGNIEKSGINYGVTTLP 271
              + +   + F  G   M  +G  +   ++++ +N+GV  LP
Sbjct: 240 TAYEQNEIRAIFLDGKVGMIQSGSGAAARLKETKVNWGVAPLP 282