Pairwise Alignments

Query, 524 a.a., maltose ABC transporter permease MalF from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., maltose ABC transporter, permease component 1 (MalF) (from data) from Pseudomonas stutzeri RCH2

 Score =  503 bits (1294), Expect = e-147
 Identities = 267/519 (51%), Positives = 367/519 (70%), Gaps = 16/519 (3%)

Query: 9   AMSDPTAVR-PADKRAFLKWAVLGAVGIVNGYATILMYSRGEVAFALLTLILTTLALYIF 67
           AM+ PT+   P      ++W +  A   ++ Y  + +Y + ++AFALL L++T +A Y+F
Sbjct: 11  AMTRPTSWGLPRFLTTGVRWLLWLAFNALSLYLVVALYVQKQMAFALLGLVVTGIASYLF 70

Query: 68  GSRKTYAHRYIYPGIAGMILFILFPLAYTVGLAFTNYSAKNQLTLERAQSVLMDQTFQSG 127
            +R+ YA RYI+P +AGM++F++FPL YTVG+ FTNYS  N L+  + +   + QT+ +G
Sbjct: 71  INRRMYAQRYIFPSVAGMLVFVIFPLLYTVGIGFTNYSGTNLLSQAQVERYHLSQTYLAG 130

Query: 128 ESYAFQLYKTEQGYRLLIEDGDERLATAPFSLSGNVPTDLNL-----EVIGGIDGEVEPI 182
           E + F L+++  G RL ++ G+  +  +P  L+G    +  L     E + G+ GE   +
Sbjct: 131 ERFRFTLHQSPDGERLRVDKGELGVFVSP-PLTGEPDPEAPLSLLPAESVEGL-GEALAL 188

Query: 183 KTIIGYRTELSGIDLHFPDGEDIRMSGLRKFAAVKPLYTLQDDGETLTNNQSGQVLRPNM 242
           + +I  R  L    +  PDG  +R+ GLR+ AAV+P Y  QD    L   ++G  L  +M
Sbjct: 189 REVIQRRKVLEQWVMQAPDGSLLRLYGLREVAAVEPQYR-QDGPGVLVETRTGARLTADM 247

Query: 243 EIGFYQPINESGEFVGERVSPGFVVSIGTHNFERVWKDEGIKEPFINIFIWTVIFSVLTV 302
           E GFY  ++E+G+     V PGF V  G  NF RV  +  I+EPF+ IF WT  F+ LTV
Sbjct: 248 ERGFY--VDETGK----AVPPGFTVFTGFANFSRVLTEPSIREPFMQIFAWTFAFAGLTV 301

Query: 303 IFTLMIGLVLASVVQWEALKGRAVYRVLLILPYAVPAFISILIFRGLFNQSFGEINMVLN 362
           +FTL +GLVLAS++QWE ++G+A YR++LILPYAVP FISIL+FRGLFNQ+FGEIN++L 
Sbjct: 302 VFTLAVGLVLASLLQWELVRGKAFYRLMLILPYAVPGFISILVFRGLFNQNFGEINLLLE 361

Query: 363 GLFGLSPAWFSDPLLAKTMVLIVNTWLGFPYMMILCMGLLKAIPDDLYEASAIDGANFIH 422
           GLFG+ P WFSDP LA+TM+LIVNTWLG+PYM++LCMGLL+AIP D YEASAIDGA+ + 
Sbjct: 362 GLFGIRPDWFSDPSLARTMILIVNTWLGYPYMLLLCMGLLQAIPRDQYEASAIDGASPLD 421

Query: 423 NFTKITLPMMIKPLTPLLIASFAFNFNNFVMIQLLTQGGPNRIGTSEPAGYTDLLVSYTY 482
           N  +ITLP +IKPL PLLIA FAFNFNNFV+I LLT+GGP+ IG + PAG TDLLVSYTY
Sbjct: 422 NLLRITLPQLIKPLMPLLIACFAFNFNNFVLITLLTRGGPDIIGATTPAGTTDLLVSYTY 481

Query: 483 RIAFEGTGGQDFGLASAIATLIFLLVGALALLNLRFTKL 521
           RIAF+ + GQDF LA+AIAT+IF+LVGA+ALLNL+ +K+
Sbjct: 482 RIAFQDS-GQDFALAAAIATMIFILVGAMALLNLKLSKV 519