Pairwise Alignments

Query, 524 a.a., maltose ABC transporter permease MalF from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., carbohydrate ABC transporter membrane protein 1, CUT1 family from Pseudomonas syringae pv. syringae B728a

 Score =  111 bits (277), Expect = 4e-29
 Identities = 72/242 (29%), Positives = 127/242 (52%), Gaps = 16/242 (6%)

Query: 277 VWKDEGIKEPFINIFIWTVIFSVLTVIFTLMIGLVLASVVQWEALKGRAVYRVLLILPYA 336
           +W    +   + N    T+ F+V++V   +++GL++A ++  +   GRA+ R L+++P+A
Sbjct: 82  IWSGVLVDPQWWNAVRNTLYFTVVSVGLEMVLGLMVALLLNVK-FTGRALVRALILIPWA 140

Query: 337 VPAFISILIFRGLFNQSFGEIN--MVLNGLFGLSPAWFSDPLLAKTMVLIVNTWLGFPYM 394
           +P  +S  I+  + N  FG IN  M+  GL     AW +D  L+   V+IV+ W   P++
Sbjct: 141 IPTIVSAKIWSWMLNDQFGIINHMMLSLGLIDAPLAWTADADLSMWAVIIVDVWKTVPFV 200

Query: 395 MILCMGLLKAIPDDLYEASAIDGANFIHNFTKITLPMMIKPLTPLLIASFAFNFNNFVMI 454
            +L +  L+ +P D YEA+ +DG + +  F ++TLP+++  L    I     +   F +I
Sbjct: 201 TLLMLAALQMLPSDCYEAARVDGIHPVRVFWRVTLPLLMPALLVAAIFRILDSLRVFDVI 260

Query: 455 QLLTQGGPNRIGTSEPAGYTDLLVSYTYRIAFEGTGGQDFGLASAIATLIFLLVGALALL 514
            +LT    + +  S  A     LV +           QD G  SA +TL+FL+V  +A+L
Sbjct: 261 YVLTSNSSSTMSMSVYA--RQHLVEF-----------QDVGYGSAASTLLFLVVAVIAML 307

Query: 515 NL 516
            L
Sbjct: 308 YL 309