Pairwise Alignments

Query, 524 a.a., maltose ABC transporter permease MalF from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score = 99.4 bits (246), Expect = 2e-25
 Identities = 68/223 (30%), Positives = 117/223 (52%), Gaps = 14/223 (6%)

Query: 287 FINIFIWTVIFSVLTVIFTLMIGLVLASVVQWEALKGRAVYRVLLILPYAVPAFISILIF 346
           F++    TV F V  V+    IG ++A ++     +G+ +Y  +L+ P  +   +  L++
Sbjct: 75  FLHASWLTVGFVVAVVLIEFAIGFLIALMLNG-VRRGKPIYYAILLCPLLINPVVVGLVW 133

Query: 347 RGLFNQSFGEINMVLNGLFGLSPA-WFSDPLLAKTMVLIVNTWLGFPYMMILCMGLLKAI 405
           R + + + G  N  L GL GLSP  W  D  +A   ++ V+ W    +M++L +  L A+
Sbjct: 134 RMVLHPTLGVANYAL-GLIGLSPVNWLGDVTVAFWTLVGVDIWHQVSFMIVLLLAGLSAL 192

Query: 406 PDDLYEASAIDGANFIHNFTKITLPMMIKPLTPLLIASFAFNFNNFVMIQLLTQGGPNRI 465
           P + YEA+ +DGA+    F  ITLP+M + +   L+    F    + ++ ++T+GGP   
Sbjct: 193 PAEPYEAARVDGASVFQRFWHITLPLMRRVILVTLLIRMIFAVKTYDLVYIMTRGGP--- 249

Query: 466 GTSEPAGYTDLLVSYTYRIAFEGTGGQDFGLASAIATLIFLLV 508
           GT+     TDL+    YR AF G    + G A+A+A L+ + V
Sbjct: 250 GTA-----TDLVSYSIYRTAFVGL---NLGQATAMAGLLLIPV 284