Pairwise Alignments

Query, 524 a.a., maltose ABC transporter permease MalF from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  103 bits (256), Expect = 1e-26
 Identities = 76/256 (29%), Positives = 128/256 (50%), Gaps = 24/256 (9%)

Query: 269 IGTHNFERVWKDEGIKEPFINI-FIWTVIFSVLTVIFTLMIGLVLASVVQWEALKGRAVY 327
           +G  NFE ++ D     PF    F+ T +FS+L  + ++ + L LA +     +KG   Y
Sbjct: 53  VGLGNFEFLFSD-----PFYRASFVTTAVFSILVTVVSMGVALYLALLAD-RLIKGSGTY 106

Query: 328 RVLLILPYAVPAFISILIFRGLFNQSFGEINMVLNGLFGLSPAWFSDPLLAKTMVLIVNT 387
           R LLI PYAV   ++ +++  +FN   G +   L G  G       +   A  +V++ + 
Sbjct: 107 RTLLIWPYAVAPAVAGVLWLFMFNTRVGVVTWYL-GQLGYDWNHVLNEEEAMGLVVVASA 165

Query: 388 WLGFPYMMILCMGLLKAIPDDLYEASAIDGANFIHNFTKITLPMMIKPLTPLLIA---SF 444
           W    Y  +  +  L+AIP  + EA+AIDGA F   F  I  P ++ P+T  L+     +
Sbjct: 166 WGRISYNFLFFLAGLQAIPKSVIEAAAIDGARFWTRFRTIVFP-LLSPVTFFLLVVNIIY 224

Query: 445 AFNFNNFVMIQLLTQGGPNRIGTSEPAGYTDLLVSYTYRIAFEGTGGQDFGLASAIATLI 504
           AF F  F +I  +T GGP +         T +LV   Y++  +G  GQD G ++A + ++
Sbjct: 225 AF-FETFGVIHTITSGGPQQA--------TTILV---YKVYSDGFVGQDLGSSAAQSVVL 272

Query: 505 FLLVGALALLNLRFTK 520
            +LV  L ++  ++ +
Sbjct: 273 LVLVSILTVIQFKYVE 288