Pairwise Alignments

Query, 253 a.a., DeoR/GlpR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., DeoR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  109 bits (272), Expect = 6e-29
 Identities = 78/253 (30%), Positives = 121/253 (47%), Gaps = 15/253 (5%)

Query: 1   MKAVKRHQEIIELVQAQGFVSTEELVERFDVSPQTIRRDLNELAEANKLRRNHGGATIAT 60
           +  ++R QEI+ + Q QG VS  +L E F VS  TIR DL  L +   L R+ GGA + +
Sbjct: 4   LNTIERQQEIVRMTQLQGKVSVAKLAEHFGVSEVTIRSDLAMLDQKQLLVRSRGGAMVNS 63

Query: 61  S-------SENSSYHTRQVSYQNEKEKVAMALVQHIPDGATLFIDIGTTPEAIARALMVN 113
                    E  S H+   + + E  K A ALVQ+   G  L +D GTT + +A  LM  
Sbjct: 64  ELIRELSLKEKGSCHS---ALKQELGKAAAALVQN---GDRLLLDSGTTTQQVAANLM-E 116

Query: 114 HHQLRVVTNNLNVATMLMSKPDFSIILAGGEVRNKDGGVTGEATLDFISQFRLDFGILGI 173
           H  L V+TN LN+AT L    +  ++L GG +R K     G    + +  +  +  ILG+
Sbjct: 117 HKDLIVMTNGLNIATELAKADEVEVMLTGGLLRKKSLSFYGNIAENSLRDYNFNKLILGV 176

Query: 174 SGIDYDGSLLDFDYHEVRVKRAIIENSRSVFLAVDHSKFGRNAMVKLGTLADVDLVITDQ 233
            G D    L      E  + R + E +  + +  D SKF + A   + +   +  ++TD 
Sbjct: 177 DGFDLRVGLTTHFEKEASLNRMMCEIASEIIVVTDSSKFDQQAFHVICSSRRITRLVTDT 236

Query: 234 -TPPKEIEAFAKE 245
             P + ++   K+
Sbjct: 237 GIPERYVDELTKQ 249