Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  116 bits (291), Expect = 7e-31
 Identities = 80/268 (29%), Positives = 137/268 (51%), Gaps = 9/268 (3%)

Query: 51  EYLYANPLTLKLFEADAQSLFGKTDH--DFFHDDQLSDILAADQQVFETRLSVIHEERA- 107
           + LY +P   ++F   A  +    +   D  + D   D+  A++ + E  +    E+R  
Sbjct: 61  QVLYVSPAYERIFGRPAGLVLADFNEWRDAIYPD---DLEYAERSLAEVLVKGAVEDREY 117

Query: 108 -IAKSNGLVRIYRAVKHPILHRVTGEVIGLIGVSTDITDIVELREQLYQLANTDSLTQLC 166
            I   NG +R              G+ + ++G++ DIT+   L  +L +LA TD LTQ  
Sbjct: 118 RIIAGNGQIRWLSDKCFINRKAEPGQPVIVVGIAEDITEKKLLESELQRLATTDVLTQSS 177

Query: 167 NRRKLWADFRAAFARAKRLRQPLSCISIDIDNFKLINDQFGHDKGDEVLCFLAKLFQSVI 226
           NRR  +      F +A+    P++ + +DID+FK+IND +GH +GD VL  +A+  +SV+
Sbjct: 178 NRRHFFECAHREFEQARLQGMPMAFLLLDIDDFKVINDTYGHQEGDTVLQRIAESGRSVL 237

Query: 227 SDHHFCGRVGGEEFIIVLENTHVETAFHLAEQIRQRFAEHPF--FEQNEHIYLCAGVSSL 284
                 GR+GGEEF  V      + A  +AE++++      F   EQ+  I +  G++ +
Sbjct: 238 RRGDLFGRIGGEEFAAVFPGCPPDMALQVAERLQREIQRLMFRCGEQSFGITVSQGLTGI 297

Query: 285 HHGDHDIADIYRRSDQALYKAKRNGRNR 312
              D  +  ++ R+D A+Y+AKR G+NR
Sbjct: 298 TPEDQSLDSLFARADAAMYEAKRKGKNR 325