Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Pseudomonas fluorescens FW300-N2E2

 Score =  118 bits (296), Expect = 2e-31
 Identities = 70/184 (38%), Positives = 103/184 (55%), Gaps = 9/184 (4%)

Query: 142 DITDIVELREQLYQ-------LANTDSLTQLCNRRKLWADFRAAFARAKRLRQPLSCISI 194
           D+TD+   R QL         L++TD LT L NR    +D +AA+AR +R    LS + +
Sbjct: 133 DVTDVATNRHQLQAANAQLQLLSSTDRLTGLYNRGHWESDLKAAYARHQRYGHALSLVML 192

Query: 195 DIDNFKLINDQFGHDKGDEVLCFLAKLFQSVISDHHFCGRVGGEEFIIVLENTHVETAFH 254
           DID+FK +ND +GH  GD+V+  +A+L +    D    GR GGEEF +VL +T    A  
Sbjct: 193 DIDHFKRVNDTYGHQAGDKVIEQVARLLREHARDSDVVGRYGGEEFGVVLSDTDSSGAHA 252

Query: 255 LAEQIRQ--RFAEHPFFEQNEHIYLCAGVSSLHHGDHDIADIYRRSDQALYKAKRNGRNR 312
            AE++R      E  + +Q     +  GV+ L    +D AD+  R+DQALY +K+ GRNR
Sbjct: 253 FAERMRHSVEALEVLYNDQTIRFTISLGVADLSQPSNDHADLIARADQALYTSKKTGRNR 312

Query: 313 CCIY 316
             ++
Sbjct: 313 VTVH 316