Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N1B4

 Score =  123 bits (309), Expect = 5e-33
 Identities = 81/266 (30%), Positives = 138/266 (51%), Gaps = 5/266 (1%)

Query: 51  EYLYANPLTLKLFEADAQSLFGKTDH--DFFHDDQLSDILAADQQVFETRLSVIHEERAI 108
           + LY +P   ++F   A  L    +H  D  + D L     +  QV   + +V   E  I
Sbjct: 61  QVLYVSPAYERIFGRPAGLLLSDYNHWRDSVYPDDLDYAERSLAQVL-VKGAVEDREYRI 119

Query: 109 AKSNGLVRIYRAVKHPILHRVTGEVIGLIGVSTDITDIVELREQLYQLANTDSLTQLCNR 168
             ++G VR              G+ + ++G++ DIT+  ++  +L  LA+TD LTQ  NR
Sbjct: 120 IAADGQVRWLSDKCFINRQAEPGQPVIIVGIAEDITEKKQMEAELQHLASTDVLTQSSNR 179

Query: 169 RKLWADFRAAFARAKRLRQPLSCISIDIDNFKLINDQFGHDKGDEVLCFLAKLFQSVISD 228
           R  +      F +A+    P++ + +DID+FK++ND +GH +GD+VL  +A+  ++ +  
Sbjct: 180 RHFFECAHREFEQARLNGAPMAFLLLDIDDFKVVNDTYGHQEGDKVLQRIAESGRAALRR 239

Query: 229 HHFCGRVGGEEFIIVLENTHVETAFHLAEQIRQRFAEHPFFEQNE--HIYLCAGVSSLHH 286
               GR+GGEEF  V      + A  +AE++++      F   N+   I +  G+SSL +
Sbjct: 240 GDLFGRIGGEEFAAVFPGCAPDMAMQVAERLQREIQRLSFSHDNQTFGITVSQGLSSLTY 299

Query: 287 GDHDIADIYRRSDQALYKAKRNGRNR 312
            D  I  ++ R+D A+Y+AKR G+NR
Sbjct: 300 EDESIDRLFARADAAMYQAKRQGKNR 325