Pairwise Alignments

Query, 321 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  118 bits (295), Expect = 2e-31
 Identities = 86/276 (31%), Positives = 141/276 (51%), Gaps = 22/276 (7%)

Query: 53  LYANPLTLKLFEADAQSL---FGKTDHDFFHDD----QLSDILAADQQVFETRLSVIHEE 105
           +Y +P   ++F      L   +G+  +  + DD    Q S +   D+   ETR      E
Sbjct: 65  IYVSPAYERIFGRSPALLLADYGEWRNAIYPDDVEFAQKSMLAVLDEGAVETR------E 118

Query: 106 RAIAKSNGLVRIYRAVKHPI---LHRVTGEVIGLIGVSTDITDIVELREQLYQLANTDSL 162
             I + +G +R + + K  I     R  G +I  +G++ DIT+  +L  +L +LA TD L
Sbjct: 119 YRIIRGDGQLR-WLSDKCFIGRGADRGQGPII--VGIAEDITEKKQLEGELQRLATTDVL 175

Query: 163 TQLCNRRKLWADFRAAFARAKRLRQPLSCISIDIDNFKLINDQFGHDKGDEVLCFLAKLF 222
           TQ  NRR  +   R  F RA++    L+ + +DID+FK IND  GH  GD+VL  +A+  
Sbjct: 176 TQSSNRRHFFECARIEFERARQFASSLAFLLLDIDDFKRINDTHGHQMGDQVLQKVARCG 235

Query: 223 QSVISDHHFCGRVGGEEFIIVLENTHVETAFHLAEQIRQRFAEHPFFEQNE---HIYLCA 279
            SV+      GR+GGEEF  VL     + A  +AE++++      F  +N     +    
Sbjct: 236 ASVLRQSDLFGRIGGEEFAAVLPGCQPDLAEQIAERLQREIERVVFTAENGERFRVTASL 295

Query: 280 GVSSLHHGDHDIADIYRRSDQALYKAKRNGRNRCCI 315
           G++ L   D +++ ++ R+D A+Y AKR G+N+  +
Sbjct: 296 GLTYLRANDAELSTVFARADAAMYTAKRLGKNQVIV 331